Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g02008 ATGGGTACATTAATTGGAATTGGTGGAGCAATGGTTCTTACATTCGTTAAAGGTAAAGATATTGAGATAGGGACGTTTCACTTTAACCTTTTGCCTGAGAATGGCGCACACCCACAGGTGCAGGCTACCGGCGGCGGTGCCAAGACCGTCATGGGTGCTTTGTGCGCTCTGGCTAGTGGAGTCAGTTATGCGTTCTGGCTCATCATTCAGGCGAAAATGAGTGAAAGATATCCTCATCCCTACTCTAGCACAGCGTTGATGTCACTGTGGGGAGCATTAGTGTCCATTATGTTTGCACTTTTCGTTGAGAGGGACTGGAATCAGTGGAGGTTGGGTTGGAATATTAGGCTTTGGACTGCAGCATATGCGGGTATTGTGGTTTCTGGGATTATGGTGGTTGTGATTTCATGGTGCATCCGCATGAGAGGCCCATTATTTGCCTCTGTTTTTAACCCTCTGATGCTTGTAATAGTCGCCTTGGCTGGTTCTACCATGTTGAAGGAGAAGCTACACCTTGGATGCATTATTGGAGCTGTGCTGATTGTGTGTGGCTTATACATGGTTTTATGGGGTAAAAGTAAAGAGATGAAGAAAAATAATCAATTGGTGCCAGCAGCAGATAACAGCCATGAGGATGAGTCTGATAGGGTGGAAGTAGTAGTTAGGGATGAAGTAGAAGATAAAAGCAACCAAAAGAAAAGACATAAAAATGATGAAAAAGTAATTGGGGATTACCGCGAAGATCGAAAGCTAGAGCAGAATTTAGATGTACCAAGTCAGAGTAACCAGGGAAGAGATGAGGAAAATTCTAATACTGTTTTCTGTACTTAA 831 0.4368 MGTLIGIGGAMVLTFVKGKDIEIGTFHFNLLPENGAHPQVQATGGGAKTVMGALCALASGVSYAFWLIIQAKMSERYPHPYSSTALMSLWGALVSIMFALFVERDWNQWRLGWNIRLWTAAYAGIVVSGIMVVVISWCIRMRGPLFASVFNPLMLVIVALAGSTMLKEKLHLGCIIGAVLIVCGLYMVLWGKSKEMKKNNQLVPAADNSHEDESDRVEVVVRDEVEDKSNQKKRHKNDEKVIGDYREDRKLEQNLDVPSQSNQGRDEENSNTVFCT 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g02008 276 MobiDBLite consensus disorder prediction 255 276 - -
Vian6g02008 276 PANTHER WAT1-RELATED PROTEIN 1 203 IPR030184 GO:0016020|GO:0022857
Vian6g02008 276 SUPERFAMILY Multidrug resistance efflux transporter EmrE 90 194 - -
Vian6g02008 276 MobiDBLite consensus disorder prediction 224 254 - -
Vian6g02008 276 MobiDBLite consensus disorder prediction 224 276 - -
Vian6g02008 276 Pfam EamA-like transporter family 51 189 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g02008 Vian-Chr6 37176199 37177405 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g02008 1 216 Nodulin-like Gene Family AT1G68170 43.519 3.03e-57 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g02008 - - vra:106774988 449.514