Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g02007 ATGGATCACCAAGCTGACACTAACAGAACTGATTTGATGACTATCACACGCTTTGTTCTGAATGAACAGTCTAAGTATCCCGAATCACGTGGTGATTTCACCATCCTTCTCAATACCATTGTTCTTGGTTGCAAATTTGTTTGTTCTGCTGTTGGCAAGGCTGGGTTGGCTAAACTCATAGGACTTGCTGGAGAGACCAATGTTCAAGGGGAGGAGCAAAAGAAATTGGATGTACTTTCAAATGAAGTATTTGTGAAAGCCTTAATTAGCAGTGGACGCACAGTAAGTGTATACATTGTTGTGTTTGATCCTTTGGATGGATCCTCAAACATTGACTGCGGAGTTTCTATTGGAACTATCTTTGGAATTTACATGGTAAAGAATGAGGCTAAAGTAAGTCTTGAAGATGCAATGCAACCTGGAAACCAAATGCTAGCAGCAGGTTATTGCATGTATGGAAGCTCTTGCACGTTCGTGCTTAGCACAGGAAATGGAGTGAATGGTTTTACACTCGATCCTTCTCTTGGGGAGTTCATATTAACTCACCCCAACATCAAGATACCAAGGAAAGGAAATATTTATTCCGTGAATGAAGGAAATGCCAAAAACTGGGATGAACCAACCACTAAATATGTACAAAAGTGCAAGTTTCCTCAAGATGGTTCACCACCAAAGTCTCTAAGGTACATAGGAAGTATGGTTGCTGACATCCATCGAACATTGCTTTATGGTGGTATCTTCATGTACCCTGCTGATATAAAGAGTCCACATGGAAAGCTACGGATTCTTTATGAAGTATTTCCAATGTCATATTTGATGGAGCAAGCAGGAGGTCAGGCTTTCACAGGAAAACGACGGGCTCTTGACTTGGTTCCAAGAGAATTACATGAACGATCACCAATATTCCTAGGCAGTTACGATGACATTGAGCAAATCAAAGAGCTTTATGCATCATCCAAAGCAGATGGTGCATGA 975 0.4103 MDHQADTNRTDLMTITRFVLNEQSKYPESRGDFTILLNTIVLGCKFVCSAVGKAGLAKLIGLAGETNVQGEEQKKLDVLSNEVFVKALISSGRTVSVYIVVFDPLDGSSNIDCGVSIGTIFGIYMVKNEAKVSLEDAMQPGNQMLAAGYCMYGSSCTFVLSTGNGVNGFTLDPSLGEFILTHPNIKIPRKGNIYSVNEGNAKNWDEPTTKYVQKCKFPQDGSPPKSLRYIGSMVADIHRTLLYGGIFMYPADIKSPHGKLRILYEVFPMSYLMEQAGGQAFTGKRRALDLVPRELHERSPIFLGSYDDIEQIKELYASSKADGA 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g02007 324 FunFam Fructose-1,6-bisphosphatase class 1 186 320 - -
Vian6g02007 324 PIRSF FBPtase 9 321 IPR028343 GO:0042132
Vian6g02007 324 Gene3D - 4 96 - -
Vian6g02007 324 Gene3D - 97 185 - -
Vian6g02007 324 Gene3D - 186 323 - -
Vian6g02007 324 Pfam Fructose-1-6-bisphosphatase, C-terminal domain 187 316 IPR044015 -
Vian6g02007 324 Hamap Fructose-1,6-bisphosphatase class 1 [fbp]. 13 318 IPR000146 GO:0005975|GO:0016791
Vian6g02007 324 ProSitePatterns Fructose-1-6-bisphosphatase active site. 258 270 IPR020548 GO:0005975|GO:0042578
Vian6g02007 324 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE-RELATED 3 317 IPR000146 GO:0005975|GO:0016791
Vian6g02007 324 SUPERFAMILY Carbohydrate phosphatase 8 316 - -
Vian6g02007 324 CDD FBPase 20 316 IPR000146 GO:0005975|GO:0016791
Vian6g02007 324 PRINTS Fructose-1,6-bisphosphatase signature 137 160 IPR028343 GO:0042132
Vian6g02007 324 PRINTS Fructose-1,6-bisphosphatase signature 292 317 IPR028343 GO:0042132
Vian6g02007 324 PRINTS Fructose-1,6-bisphosphatase signature 168 191 IPR028343 GO:0042132
Vian6g02007 324 PRINTS Fructose-1,6-bisphosphatase signature 194 221 IPR028343 GO:0042132
Vian6g02007 324 PRINTS Fructose-1,6-bisphosphatase signature 38 65 IPR028343 GO:0042132
Vian6g02007 324 PIRSF FBPtase_SBPase 9 321 IPR000146 GO:0005975|GO:0016791
Vian6g02007 324 Pfam Fructose-1-6-bisphosphatase, N-terminal domain 97 183 IPR033391 -
Vian6g02007 324 Pfam Fructose-1-6-bisphosphatase, N-terminal domain 13 94 IPR033391 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g02007 Vian-Chr6 37165054 37167883 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Vian6g02007 FBPase_C 9.2e-59 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g02007 K03841 - gmx:100797157 597.816