Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01998 ATGGAGGGACGTAGTTTAAACTGTCTAATGTTTGTTTTGCTTGGTTTGACTATTGTGAACACAGGAGAAGTTAGTGGGCAAGGGACGCGTGTGGGGTTCTATTCCCGCACGTGTCCACGAGCTGAGTCCATTGTTAAGTCCACTGTTCGAGATCATCTTAAGTCCGATCCTAGTTTGGCAGCAGGGTTGCTTCGGTTGTACTTCCATGATTGCTTCGTGCAAGGTTGTGATGCTTCCGTTCTCATCGAGGGTCCTCAAACCGAGAGAACAGCATTGCCAAACCTTAGTTTAAAAGGATTTGAGAGTGATGGACTGAGTTGGAAAGTGCCTACTGGACGTAGAGATGGACGCATATCACAGGCTTCAGAAGCGAATAACTTGCCTTCTCCTTTCGATTCTGTTGCTATTCTGACGCAGAAGTTTGCAGCAAAGGGTCTCAACACTCAAGACCTCGTCGTCACTTCTGCACAGTGCCCTCAAAGTACAGGTGCTCAAAACCGTGTTGCACTGGATACTGGCAGTGAATTCGAATTTGATAGATCTTACTTTAAAAATTTGAAGAATGGACGTGGAATTTTGGAGTCTGATCAATTGCTTTGGACCGATGCTTCCACGAAGACGTTTGTGGAAGAGTACTCCGACTCAGCGTTGCGTTTCAAATCGGACTTTGCAAAGTCTATGGTGAAGATGGGCAACATTGAGCTGAAGACCGGTTCTGATAGTGAAATTCGAACCATATGTTCTGCCATTAACTAG 756 0.4563 MEGRSLNCLMFVLLGLTIVNTGEVSGQGTRVGFYSRTCPRAESIVKSTVRDHLKSDPSLAAGLLRLYFHDCFVQGCDASVLIEGPQTERTALPNLSLKGFESDGLSWKVPTGRRDGRISQASEANNLPSPFDSVAILTQKFAAKGLNTQDLVVTSAQCPQSTGAQNRVALDTGSEFEFDRSYFKNLKNGRGILESDQLLWTDASTKTFVEEYSDSALRFKSDFAKSMVKMGNIELKTGSDSEIRTICSAIN 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01998 251 Gene3D Peroxidase, domain 2 156 230 - -
Vian6g01998 251 SUPERFAMILY Heme-dependent peroxidases 30 251 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vian6g01998 251 Gene3D Peroxidase, domain 2 128 155 - -
Vian6g01998 251 ProSiteProfiles Plant heme peroxidase family profile. 28 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g01998 251 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Vian6g01998 251 Pfam Peroxidase 103 215 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g01998 251 Pfam Peroxidase 45 101 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g01998 251 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g01998 251 PRINTS Haem peroxidase superfamily signature 103 115 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g01998 251 PRINTS Haem peroxidase superfamily signature 171 186 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g01998 251 Gene3D - 103 127 - -
Vian6g01998 251 Gene3D - 30 102 - -
Vian6g01998 251 Gene3D - 231 251 - -
Vian6g01998 251 CDD secretory_peroxidase 30 250 IPR033905 GO:0004601|GO:0042744
Vian6g01998 251 PANTHER PEROXIDASE 25-RELATED 14 101 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g01998 251 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g01998 251 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01998 Vian-Chr6 37107873 37109012 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01998 6 251 Peroxidase AT5G64120 43.849 1.83e-86 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01998 K00430 - gmx:100783523 312.768