Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01988 ATGAGTCAGCGTGTGGGTGACGAGGTGACAAAGGCCATGGGAGAAATAAGAAGTGGAGCATCTTCACGCAGACATGGAGATACTTTGCCACACATTCATAAGGTGGGATCTCCTCCTAAGCAGACACTTTTCAAAGAGATCAAAGATTCTCTGGCTGAGACTTTCTTCCATGACAAACCCTTAAGCAAATTTAAAGACCAGAGCTTCTTTAGAATCTTTGTATTAGCCCTGCAGTCTCTCTTCCCCATTTTAGAATGGGGAAGAGATTACAATCTTAAAAAATTCAGAGGTGATTTGATTTCTGGTCTCACTATTGCAAGTCTCTGCATCCCTCAGGACATTGCATACGCAAAGCTTGCTCATTTGGATCCACAGTATGCACTGTACACAAGTTTTGTTGCTCCTCTTGTGTATGCTTTCATGGGAAGCTCAAGAGACATTGCAATTGGACCAGTAGCGGTTGTGTCCCTCCTTCTTGGGACAACGCTGTCGGATGAGATCAGCAACATCAAAAGTCATGATTACCTGCGTCTTGCATTTACTGCCACCTTCTTTGCAGGAGTTACTCAAATGGCACTAGGTGTTCTCAGGCTTGGTTTCTTGATTGACTTTTTGTCTCATGCTGCTATTGTGGGATTCATGGCTGGAGCTGCCATTACAATTGCACTGCAACAGCTTAAGGGTTTTCTTGGCATAAAAAACTTCACTACGAAAACTGATATTGTTTCTGTCATGCGCTCAGTGTTTCAAGCAGCACACCACGGGTGGAATTGGGAGACAATACTCATTGCAGTAGCATTCTTGACTTTCCTTCTTGTAACCAAGTACATCGCTAAAAGGAATAAGAAACTCTTTTGGGTGGCTGCAATTTCTCCTATGATATCTGTCATAGTGTCTACCTTTTTTGTCTACATTACCAGGGCAGACAAGAAAGGAGTGGCAATTGTGAGACATGTTAAGAAGGGTGTGAATCCATCATCTGCCAACGAGATATTTTTCAGCGGAAAATACCTAGGCGCCGGTATTCGGATTGGTGTGATATCCGGAATGGTAGCTCTCACGGAAGGCGTAGCAATTGGGAGAACATTTGCTACCATGAAAGACTATGCACTGGATGGTAACAAAGAAATGATGGCAATGGGAGCAATGAACATGGTTGGTTCTCTAACATCTTGCTATGTGGCAACAGGCTCATTTTCTCGCTCAGCGGTGAACTACATGGCCGGTTGTAAAACTGCAGTATCGAACATTGTTATGTCGGTGGTTGTGTTGTTGACTCTGCTACTCATTACGCCGCTCTTTAAGTACACTCCAAATGCGGTGCTTGCTTCTATTATAATAGCTGCGGTGCTTGGCCTTGTGAACATTGAAGCTATTATTCTTTTATGGAAGATTGACAAGTTCGATTTTGTTGCTTGCATTGGAGCCTTGTTTGGTGTGATCTTCAAAAGTGTGGAGATTGGCCTTCTAATAGCGGTGGCCATATCTTTTGCCAAAATTCTCATACAAGTGACAAGGCCAAGGGTTGCAGTACTAGGGAAGCTTCCAGGAACTACAGTTTATAGGAACATCCAGCAATACCCCAAAGCAGCCCAGATTACTGGCATGCTCATTGTCAGGGTTGACTCTGCAATCTACTTCTCAAACTCCAACTACATCAAGGAGAGAATTTTGAGATGGCTGAGTGAAGAAGAAGCCCAAAGGACAGCAAGTGGATTCCCCAGAATACAATATCTCACTGTGGAGATGTCACCTGTTACTGATATTGACACAAGTGGCATCCATGCCTTGGAAGAGTTATACAAGAGTCTCCAGAAAAGAGAAGTCCAGCTTATCTTGGCAAACCCAGGACCAATTGTAATAGAGAAGCTCCATGCATCAAAGTTAACAGACTTAATCGGAGAAGATAAAATATTTCTAACAGTGGCTGATGCTGTTTCAACTTTTGGTCCAAAGGGTGAAGTAGAAGTATGA 1974 0.4326 MSQRVGDEVTKAMGEIRSGASSRRHGDTLPHIHKVGSPPKQTLFKEIKDSLAETFFHDKPLSKFKDQSFFRIFVLALQSLFPILEWGRDYNLKKFRGDLISGLTIASLCIPQDIAYAKLAHLDPQYALYTSFVAPLVYAFMGSSRDIAIGPVAVVSLLLGTTLSDEISNIKSHDYLRLAFTATFFAGVTQMALGVLRLGFLIDFLSHAAIVGFMAGAAITIALQQLKGFLGIKNFTTKTDIVSVMRSVFQAAHHGWNWETILIAVAFLTFLLVTKYIAKRNKKLFWVAAISPMISVIVSTFFVYITRADKKGVAIVRHVKKGVNPSSANEIFFSGKYLGAGIRIGVISGMVALTEGVAIGRTFATMKDYALDGNKEMMAMGAMNMVGSLTSCYVATGSFSRSAVNYMAGCKTAVSNIVMSVVVLLTLLLITPLFKYTPNAVLASIIIAAVLGLVNIEAIILLWKIDKFDFVACIGALFGVIFKSVEIGLLIAVAISFAKILIQVTRPRVAVLGKLPGTTVYRNIQQYPKAAQITGMLIVRVDSAIYFSNSNYIKERILRWLSEEEAQRTASGFPRIQYLTVEMSPVTDIDTSGIHALEELYKSLQKREVQLILANPGPIVIEKLHASKLTDLIGEDKIFLTVADAVSTFGPKGEVEV 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01988 657 Gene3D STAS domain 506 650 IPR036513 -
Vian6g01988 657 PANTHER SULFATE TRANSPORTER 42 647 IPR001902 GO:0016020|GO:0055085
Vian6g01988 657 NCBIfam sulfate permease 82 645 IPR001902 GO:0016020|GO:0055085
Vian6g01988 657 CDD STAS_SulP_like_sulfate_transporter 527 642 - -
Vian6g01988 657 ProSiteProfiles STAS domain profile. 526 649 IPR002645 -
Vian6g01988 657 Pfam Sulfate permease family 95 474 IPR011547 GO:0016020
Vian6g01988 657 SUPERFAMILY SpoIIaa-like 529 650 IPR036513 -
Vian6g01988 657 FunFam Sulfate transporter 31 506 652 - -
Vian6g01988 657 Pfam STAS domain 527 645 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01988 Vian-Chr6 36942652 36945785 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01988 21 657 Inorganic Solute Cotransporters AT1G22150 72.414 0.0 924
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01988 K17470 - gmx:100784124 1105.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g01988 6 36942652 36945785 Vian6g01988 6 36942652 36945785 ECH