Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01987 ATGAGTCAACGCGTGACTGACGAGGGTGTGAGAAAGGACATGGAGGAAATAAGAAATGGGGCATCTTCACGTAAGCATGGAGATACTTTGTCACACATTCACAGAGTGGAATCTCCTCCTAAGCAGACACTTTTCAAAGAGATCAAATATTCTGTGGTTGAGACTTTCTTCCCAGACAAACCCTTACACAAATTTAAAGACCAAAGCTTCTTTAGAGTCTTTGTATTAGCCCTGCAATCTTTCTTACCCATTTTCGAATGGGGCAGAGACTACAATCTTAAAAAGTTCAGAGGTGATTTCATTTCTGGACTCACCATTGCAAGTCTTTGCATCCCTCAAGATATTGCATACGCAAAACTTGCAAATTTGGATCCCCAATATGCACTGTACACTAGTTTTGTTACTCCTCTTGTATATGCTTTCATGGGAAGCTCAAGAGATATTGCCATTGGACCCGTAGCTGTTGTATCCCTCTTGCTTGGGACTACACTGTCCGATGAAATCAGCGACATCAAAAGTCATGAATACCTGCGCCTTGCATTTACTGCCACCTTCTTCGCAGGAGTCATTCAAATGGCACTTGGTGTTCTCAGACTTGGTTTCTTGATTGACTTTGTGTCACATGCTGCCGTTGTGGGATTCATGACTGGATCTTCCATTACAATTGCTCTGCAACAGCTTAAGGGTTTGCTTGGCATAAAAAACTTCACTAAGAAAACTGATATTGTTTCTGTCATGCGCTCGGTTTTCAGTTCAGCACACCATGGGTGGAATTGGGAGACAATAGTCATTGGATTATCATTCTTGGTTTTCCTTCTTGTAGCCAAGTATATCGGTAAAAAGAATAAGAAGCTCTTTTGGGTGGCTGCAATTTCCCCTATGATATCTGTCATAGTGTCTACCTTTTCTGTCTACATAACCAGAGCAGACAAGAAAGGCGTGGCAATTATTAAACATGTCAAGAAGGGTGTGAATTCATCATCTGCTGGAGAGATTTTTTTCAGTGGAAAATATCTAGGTCCTGGTATTCGTGTTGGTGTAATAGCTGGTATGGTAGCACTCACGGAAGCTGTAGCGATTGGGAGAACATTTGCTGCCATGAAAGACTACCCACTTGATGGCAACCAAGAAATGATGGCAATGGGGGCAATGAACATCGTTGGTTCTTTAACATCTTGTTATGTGTCTACAGGCGGTTTTTCTCGCACAGCAGTGAACAACATGGCCGGTTGTAAAACTGCAGTATCGAACATAGTTATGTCCATGGTTGTGTTATTGACTCTGCTACTTATTACGCCGCTATTCGAGTACACTCCAAATGCGGTGCTTGCTTCTATTATAATAGCCGCGGTGCTTGGCCTTGTGAACATTGAAGCTATTATTCTTTTATGGAAGATAGACAAGTTCGATTTTGTTGCTTGCATGGGAGCCCTCTTTGGTGTGGTGTTCATAAATGTTGAGATTGGCCTTCTAATTGCGGTGGCTATATCATTTTCTAAAATCCTTTTACAAGTGACAAGACCAAGGACAGCAATATTAGGGAAGCTTCCAGGAACTACTGCTTATAGGAACGTCTGGCAATACCCCAAAGCAACCCAAATTGATGGCATGCTGATTGTCAGGGTTGACTCTGCAATCTACTTCTCAAACTCCAACTATATCAAGGAGAGAATTTTGAGATGGCTGAGTGATGAAGAAAACCAAAGGATAACAAGTGGATTGTCCAGAATAGAGTATCTCACTGTTGAGATGTCACCTGTCACTGATATTGACACAAGTGGCATTCATGCTTTTGAAGAGTTATACAAGAGTCTTCAGAAAAGAAAAGTGCAGCTTATCATGGCAAACCCAGGACCAATTGTGATAGAGAAACTCCGTGCATCTAAGTTAACAGATGTTATTGGAGAAAATAACATATTTCCAACAGTGGCTGATGTTGTTTCAACTTTTGGTGCAAATGGTGAAGGAGTATTATGA 1977 0.4148 MSQRVTDEGVRKDMEEIRNGASSRKHGDTLSHIHRVESPPKQTLFKEIKYSVVETFFPDKPLHKFKDQSFFRVFVLALQSFLPIFEWGRDYNLKKFRGDFISGLTIASLCIPQDIAYAKLANLDPQYALYTSFVTPLVYAFMGSSRDIAIGPVAVVSLLLGTTLSDEISDIKSHEYLRLAFTATFFAGVIQMALGVLRLGFLIDFVSHAAVVGFMTGSSITIALQQLKGLLGIKNFTKKTDIVSVMRSVFSSAHHGWNWETIVIGLSFLVFLLVAKYIGKKNKKLFWVAAISPMISVIVSTFSVYITRADKKGVAIIKHVKKGVNSSSAGEIFFSGKYLGPGIRVGVIAGMVALTEAVAIGRTFAAMKDYPLDGNQEMMAMGAMNIVGSLTSCYVSTGGFSRTAVNNMAGCKTAVSNIVMSMVVLLTLLLITPLFEYTPNAVLASIIIAAVLGLVNIEAIILLWKIDKFDFVACMGALFGVVFINVEIGLLIAVAISFSKILLQVTRPRTAILGKLPGTTAYRNVWQYPKATQIDGMLIVRVDSAIYFSNSNYIKERILRWLSDEENQRITSGLSRIEYLTVEMSPVTDIDTSGIHAFEELYKSLQKRKVQLIMANPGPIVIEKLRASKLTDVIGENNIFPTVADVVSTFGANGEGVL 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01987 658 FunFam Sulfate transporter 31 507 653 - -
Vian6g01987 658 NCBIfam sulfate permease 83 645 IPR001902 GO:0016020|GO:0055085
Vian6g01987 658 PANTHER SULFATE TRANSPORTER 48 648 IPR001902 GO:0016020|GO:0055085
Vian6g01987 658 Gene3D STAS domain 507 651 IPR036513 -
Vian6g01987 658 ProSiteProfiles STAS domain profile. 527 650 IPR002645 -
Vian6g01987 658 Pfam Sulfate permease family 96 475 IPR011547 GO:0016020
Vian6g01987 658 SUPERFAMILY SpoIIaa-like 528 650 IPR036513 -
Vian6g01987 658 MobiDBLite consensus disorder prediction 1 30 - -
Vian6g01987 658 Pfam STAS domain 528 645 IPR002645 -
Vian6g01987 658 CDD STAS_SulP_like_sulfate_transporter 528 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01987 Vian-Chr6 36932053 36935769 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01987 1 649 Inorganic Solute Cotransporters AT1G22150 68.300 0.0 876
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01987 K17470 - gmx:100784124 1082.78