Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01986 ATGGATGTTCTCAGATTCACCTCAAACCTTAGCACCACTCACATGCTTCCACTCTCCAAAAGACATCAAACACAACATCCTCGTATGAAGTTTTCCGTTTCATGCAGAGCCACGAAACAGCAGGCGTGTGTGGAGGAGAACTTGTACAAAGTACTGAGTTTGAGTCCCATGAGTGCGACCACAGATGACATAAAGAAAGCGTACAGATCAATGGCTCTTCAGTACCACCCCGACGTGTGCCATGACGGTTCCAAGAAAGAAGAGTTGACGAGGATGTTTGTGCAGCTCAACGCCGCCTACACCACCTTATCCAACCCACAGCTTCGAGCGGATTATGATTATGAGTTGGGTTTGAGAAACAAGAAAAGTGTGGGTGATGAGAGCTGGAGATGTAGGTGGCAGGAGCAGGTGGTTGGGTTGAAGAGAAGGTCTCACACGCGTATGGCACAAAGGGATGGATCCTGGGGCTCTAGAGTCAGAGCACGAAACATGAACTGA 498 0.488 MDVLRFTSNLSTTHMLPLSKRHQTQHPRMKFSVSCRATKQQACVEENLYKVLSLSPMSATTDDIKKAYRSMALQYHPDVCHDGSKKEELTRMFVQLNAAYTTLSNPQLRADYDYELGLRNKKSVGDESWRCRWQEQVVGLKRRSHTRMAQRDGSWGSRVRARNMN 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01986 165 CDD DnaJ 47 105 IPR001623 -
Vian6g01986 165 PRINTS DnaJ domain signature 50 68 IPR001623 -
Vian6g01986 165 PRINTS DnaJ domain signature 88 108 IPR001623 -
Vian6g01986 165 PRINTS DnaJ domain signature 68 83 IPR001623 -
Vian6g01986 165 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 19 164 - -
Vian6g01986 165 MobiDBLite consensus disorder prediction 144 165 - -
Vian6g01986 165 SUPERFAMILY Chaperone J-domain 38 112 IPR036869 -
Vian6g01986 165 Gene3D DnaJ domain 33 138 IPR036869 -
Vian6g01986 165 ProSiteProfiles dnaJ domain profile. 47 116 IPR001623 -
Vian6g01986 165 Pfam DnaJ domain 47 113 IPR001623 -
Vian6g01986 165 SMART dnaj_3 46 108 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01986 Vian-Chr6 36930682 36931179 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01986 49 113 C2H2 Transcription Factor Family AT1G74250 43.284 1.80e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01986 - - vum:124830030 300.441