Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01979 ATGGTGGAGAGAAATGTTGAACTTGGAGGGAAGAGTTTCGGTTTTTCTGGGATGCTTATAAAGGAAAATAGCTTTGGAAATCGTAGAGATGCTATTTCAGATTTCAGGTCTGATAGTGGTCAAGCAAAGATGATTGCTCGCGATAAAGGAGGAGTTGCTCCGTCACGGTGGTTGGAAGATGAGCGAAGTCGCAATTTAGGGTTTCTGGTGCGAAGAGATTTGGGGCTTTCTGTGTTTCAGGTTTTGCAGGTTGCGAGGAAGTGTTTCGTGATAAAGGAGATGAAGCGAGGAGCTTCGTCTCGCGATGGCTTCTTCTTGCGGTGGCCAAATTGGGGAAAATTGTTCCTGCTTCTACGCCGCGAAGGGGAGATGGTGCACTACCGCGACGTGGGAGATCCTGCTTCTATTTCTGGTTTCGAAATCTCTGGAGGAGGAAGAACATGGAAGCGGTGGCGCGATTCTAAGAAGTGGTTTCTTGCAGGGTTTGCGTCACGATCTATGGAGAAGAAGTTCTTGGTGGTTACAACGCTTCTGGCTTTTCTGGATCTGCAAGTGAAGGTGGCGCGATGTGACAAGGGAAAAGCAATAAGAAAGATTCCACTTGCAAGTGCTGTAAGAAAAACTTCTGTAAACTCAGTGCATGGCCAAGGGACACGTCAAGGGTTTTATTCCAGTTCGTGTCCTCGTGCCGAGTCCATTGTTAAGTCCACAGTTCAATCCCACGTTAAGTCTGATCCTACTTTGGCTGCTGGCTTGCTTCGGATGCACTTCCACGATTGCTTTGTGCAAGGTTGTGACGGTTCTGTTCTCATTTCCGGTGCTAACACTGAGAGAACAAACTTTGCTAACCTTGGTTTACGAGGATTTGAGGTTATCGATGATGCAAAGACACAACTCGAGACTGCATGCCCCGGTGTTGTGTCTTGTGCTGATATCCTTGCCCTTGCTGCCCGTGATTCCGTTGTTCTGAGCGGTGGACTGAGCTATCAGGTTCCTACTGGACGCAGAGATGGACGCGTATCACAGGCCTCTGACGTGAATAACTTGCCTGCTCCTTTTGACTCTGTTGATGTTCAGAAGCAAAAATTCACAGCCAAAGGCCTCAACACTCAAGACCTCGTCACCCTTCTTGACACGGGTAGTCAAACAGCATTTGATTTATCTTACTACAATAATTTGAGGAGAGGACGCGGAATTCTGCAGTCTGATCAAGCCCTCTGGAACGATGCTTCCACTCAGAAAATTGTGCAGGGGTACTTGGGCTTAATAAGAGGGTTGCTTGGATTGAAATTCAACGTGGAATTTGGAAAATCTATGGTCAAGATGGGAAACATTGAGTTGAAGACTGGTACTGATGGTGAAATTCGCAAGATTTGTTCTGCCATCAACTAG 1392 0.4698 MVERNVELGGKSFGFSGMLIKENSFGNRRDAISDFRSDSGQAKMIARDKGGVAPSRWLEDERSRNLGFLVRRDLGLSVFQVLQVARKCFVIKEMKRGASSRDGFFLRWPNWGKLFLLLRREGEMVHYRDVGDPASISGFEISGGGRTWKRWRDSKKWFLAGFASRSMEKKFLVVTTLLAFLDLQVKVARCDKGKAIRKIPLASAVRKTSVNSVHGQGTRQGFYSSSCPRAESIVKSTVQSHVKSDPTLAAGLLRMHFHDCFVQGCDGSVLISGANTERTNFANLGLRGFEVIDDAKTQLETACPGVVSCADILALAARDSVVLSGGLSYQVPTGRRDGRVSQASDVNNLPAPFDSVDVQKQKFTAKGLNTQDLVTLLDTGSQTAFDLSYYNNLRRGRGILQSDQALWNDASTQKIVQGYLGLIRGLLGLKFNVEFGKSMVKMGNIELKTGTDGEIRKICSAIN 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01979 463 SUPERFAMILY Heme-dependent peroxidases 219 463 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vian6g01979 463 ProSiteProfiles Plant heme peroxidase family profile. 217 463 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g01979 463 PANTHER PEROXIDASE 25-RELATED 378 456 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g01979 463 Gene3D Peroxidase, domain 2 350 377 - -
Vian6g01979 463 ProSitePatterns Peroxidases active site signature. 249 260 IPR019794 GO:0004601
Vian6g01979 463 Gene3D - 443 463 - -
Vian6g01979 463 PRINTS Plant peroxidase signature 287 300 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g01979 463 PRINTS Plant peroxidase signature 251 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g01979 463 PRINTS Plant peroxidase signature 306 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g01979 463 PRINTS Plant peroxidase signature 227 246 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g01979 463 PRINTS Plant peroxidase signature 325 340 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g01979 463 PRINTS Haem peroxidase superfamily signature 325 337 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g01979 463 PRINTS Haem peroxidase superfamily signature 249 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g01979 463 PRINTS Haem peroxidase superfamily signature 378 393 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g01979 463 PRINTS Haem peroxidase superfamily signature 307 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g01979 463 Gene3D Peroxidase, domain 2 379 442 - -
Vian6g01979 463 FunFam Peroxidase 221 362 - -
Vian6g01979 463 Pfam Peroxidase 234 377 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g01979 463 Pfam Peroxidase 378 419 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g01979 463 CDD secretory_peroxidase 221 462 IPR033905 GO:0004601|GO:0042744
Vian6g01979 463 Gene3D - 223 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01979 Vian-Chr6 36882891 36890112 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01979 196 463 Peroxidase AT5G64120 52.424 6.49e-109 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01979 K00430 - gmx:100820620 402.905