Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01975 ATGAAAATGGAGGGTGCTATGCTTCTAAAGTTGGTAATTTTGGTTGCTGCTGCTGTTGTGAACACAGTGCATGGGCATTTGACGCGTGTAGGGTTCTATTCCAGAACATGTCCAGCTGCTGAATCCATTGTTACCTCCACAGTTGAGTCCCACGTTAGGTCTGACCCTACTTTGGCTGCTGCCATACTCAGGCTGCACTTCCATGATTGCTTTGTCCGAGGTTGTGATGCTTCTGTTCTCATTGCTGGCTCTGCTACCGAGAGAACAGCACGCCCAAACCTTAATCTCAGAGGATACGAGGTTATTGACGATGCAAAGGAAAAGCTCGAAGCTCGCTGCCCTGGTGTTGTGTCCTGTGCTGATATCCTTGCTCTTGCTGCTCGTGATTCTGTTGTTCTGAGTGGTGGAAGAAGTTGGAAAGTGCCAACAGGACGCAAAGATGGAAGGGTTTCAATTGGAAGCGAAGCCCTTAATTTGCCTGGTCCTAACGATACTGTCTCTGTGCAGAAGACTAAGTTTTCTGATAAGGGTCTCAACACCCTAGACCTCGTCGTTCTTGTTGGTGGACATACAATAGGCACATCAGCTTGCCAATCTTTTGCAGACAGAATATACAACCCTAATGGCACCACTGATCCTTCAATCGACCCTTCGTTTCTTCCATTTCTGCGACAGATTTGCCCACAAAACCAGCCAACGAAACGAGTGGCACTGGACACTGATAGCCAATTCAAATTCGACACTTCGTACTTTGCTCACCTGAAGAGAGGGCGTGGAATTCTCCGTTCTGATCAAGCGCTTTGGACTGATCCTTCCACAAGACCCTTTGTTCAGAAATACTTAGCCACCGCTCTTTTCAACTACCAATTCGGCAACTCTATGGTTAAGATGAGCAACATTGGTGTCAAACAGGGTGATGACGGTGAAATTCGCAACAAATGTTCTGCTATAAATTAA 957 0.4671 MKMEGAMLLKLVILVAAAVVNTVHGHLTRVGFYSRTCPAAESIVTSTVESHVRSDPTLAAAILRLHFHDCFVRGCDASVLIAGSATERTARPNLNLRGYEVIDDAKEKLEARCPGVVSCADILALAARDSVVLSGGRSWKVPTGRKDGRVSIGSEALNLPGPNDTVSVQKTKFSDKGLNTLDLVVLVGGHTIGTSACQSFADRIYNPNGTTDPSIDPSFLPFLRQICPQNQPTKRVALDTDSQFKFDTSYFAHLKRGRGILRSDQALWTDPSTRPFVQKYLATALFNYQFGNSMVKMSNIGVKQGDDGEIRNKCSAIN 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01975 318 FunFam Peroxidase 31 172 - -
Vian6g01975 318 PANTHER PEROXIDASE 25-RELATED 15 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g01975 318 Pfam Peroxidase 45 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g01975 318 ProSiteProfiles Plant heme peroxidase family profile. 27 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g01975 318 Gene3D - 31 318 - -
Vian6g01975 318 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Vian6g01975 318 CDD secretory_peroxidase 29 317 IPR033905 GO:0004601|GO:0042744
Vian6g01975 318 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g01975 318 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g01975 318 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g01975 318 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g01975 318 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g01975 318 FunFam Peroxidase 160 297 - -
Vian6g01975 318 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Vian6g01975 318 Gene3D Peroxidase, domain 2 160 297 - -
Vian6g01975 318 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g01975 318 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g01975 318 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g01975 318 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g01975 318 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g01975 318 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g01975 318 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g01975 318 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g01975 318 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g01975 318 SUPERFAMILY Heme-dependent peroxidases 29 318 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01975 Vian-Chr6 36867486 36869025 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01975 9 318 Peroxidase AT5G64120 59.317 2.49e-134 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01975 K00430 - gmx:100789249 500.36