Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01970 ATGGCTGACGAGATCAATCGCGGAACGTCCGTGGACTCCACTGAATCACGCTGGGTTTTCCAGGACGACGACGATGACTCCGATTTAGAGAACTTCGACGCGGATTTGAGATTTGGACGCCAAGCTGCGGTCGTTGATTCCGACGAGGAAGAGGACAACGCGGAGCAGAGACTCATCCGCACTGGTCCTCGCATCGATTCATTCGACGTGGAGGCTCTTGAAGTTCCCGGTGCTCACAGAAGTGACTATGAGGACATCAGTGTGGGTAAGAAAATTGTATTAGCTATTCAGACGCTTGGTGTTGTCTTTGGTGACGTTGGAACAAGTCCCTTGTATACCTTCAGTGTTATGTTTAGAAAGGCCCCTATTAATGGAAATGAAGACATTCTTGGAGCTTTATCACTTGTCTTGTACACATTAATCTTGATTCCTTTATTGAAGTATGTCCTGGTGGTTCTGTGGGCCAATGATGATGGTGAAGGTGGTACGTTTGCCTTGTACTCGTTGATCTGTCGTCATGCTAAGGTTAGTCTTCTCCCTAATCAGTTACCATCAGATGCCCGTATATCAAGCTTTAGGCTTAAGGTGCCATCCCCTGAGCTTGAAAGGTCATTAAAAATCAAGGAAAGACTTGAGAATTCTCTGACTCTGAAGAAGATTCTACTAATATTAGTTCTTACTGGTACTTCCATGGTGATTGCTAATGGTGTTGTTACACCGGCAATGTCAGTACTGTCATCTGTTGGCGGTTTAAAAGTTGGGGTAGATGCTATCGAGAAAGATGAAGTGGTGATGATTTCAGTTACCTGCCTTATCATTTTGTTCAGTGTGCAAAAGTATGGAACAAGTAAAGTGGGACTTGCAGTAGGACCTGCTTTGTTCTTATGGTTTTGTTCTCTTGCCAGCATTGGGATATACAATCTTGTGAAGTATGACAATAGTGTCTTAAGGGCATTTAATCCTATTCATATCTACTATTTCTTCAAAAGGAACTCAACCAAAGCATGGTATTCTCTTGGGGGTTGCCTACTGAGTGCAACTGGTTCTGAGGCCATGTTTGCAGATCTTTGCCACTTTTCTGTCCGATCAGTTCAGCTTTCATTTGTCTTCCTTGTTTTGCCGTGCCTGCTATTGGGTTATTTGGGTCAAGCTGCATACCTTATGGAAAACCATGCTGATGCTGGTCAAGTCTTTTTTTCTTCTGTTCCGAGTGGTGCGTTCTGGCCAGTTTTCCTTATTGCCAACGTGGCTGCACTTATTGCTAGTCGGGCTATGACAACAGCAACATTTTCATGTATAAAGCAATCAACTGCACTTGGTTGTTTCCCTCGTCTTAAAATTATACATACTTCTCGGAAATTTATGGGCCAGATCTATATCCCTGTCATAAACTGGTTCCTCTTGGGGCTTTCCCTGGTGCTTGTCTGCACTATATCTAGCATTGATGAGATTGGAAATGCCTACGGCATTGCTGAGCTCGGGGTGATGATGATGACCACTATTTTAGTAACCCTTGTTATGCTACTTATATGGCAGTTACACATCATCATAGTGCTTAGTTTCGTGGTAGTCTTCTTGGGATTGGAATTAACTTTTTTTTCATCTGTCCTGTGGAGTGTGACAGATGGAAGCTGGATTATATTGGTCTTTGCCATAATCATGTTTCTTATAATGTATATATGGAATTATGGAAGCAATCTCAAGTATGAAACTGAAGTCAAGCGAAAGCTGTCAACAGATTTGATGAGAGAATTAGGTTGTAATCTTGGGACAATACGAGCTCCTGGGATTGGTTTGCTTTATAATGAGTTGGTCAAAGGAATACCAGCAATTTTTGGCCATTTTCTAACCACACTTCCTGCAATACACTCTATGATCATATTTGTGAGTATCAAGTATGTTCCTGTTCCTATGGTACCGCAAAGTGAAAGGTTTCTTTTTCGGCGAGTCTGCCCCAAAAGCTACCATATATTTCGTTGTATTGCCAGGTATGGTTACAAAGATGTTCGGAAAGAAAATCACCAGACTTTTGAGCAGCTGCTGATTGAGAGCCTAGAGAAGTTTATTCGTCGTGAGGCTCAGGAGAGGTCATTGGAGAGTGACGGGGATGACGATTCTGATTCAGAGGATGAGTACCCTCGTTCTAGGGTTCTCATAGGTCCCAATGGGAGTGTTTACTCACTTGGTGTTCCTCTTCTCGCTGATTATAAGGATACAAGCAACCCCGTTTTAGAAGCAAGCACGTCAGAGGTGATAAGCTCCGTATTTCCTGACCCCAGTGTGTGTGACGCCGAGCAGAGCCTTGAGAGCGAGTTATCTTTTATTCACAAGGCTAAAGAATGTGGTGTTGTTTATCTTCTGGGTCACGGGGATATAAGAGCAAGGAAGGACTCGTGGTTTATCAAGAAGTTAGTTATAAACTATTTTTATGCTTTTTTGAGAAAGAATTGCAGAAGGGGAATCACGACTTTAAGTGTACCACACTCAAATCTTATGCAAGTTAGCATGACTTACATGGTGTGA 2523 0.4277 MADEINRGTSVDSTESRWVFQDDDDDSDLENFDADLRFGRQAAVVDSDEEEDNAEQRLIRTGPRIDSFDVEALEVPGAHRSDYEDISVGKKIVLAIQTLGVVFGDVGTSPLYTFSVMFRKAPINGNEDILGALSLVLYTLILIPLLKYVLVVLWANDDGEGGTFALYSLICRHAKVSLLPNQLPSDARISSFRLKVPSPELERSLKIKERLENSLTLKKILLILVLTGTSMVIANGVVTPAMSVLSSVGGLKVGVDAIEKDEVVMISVTCLIILFSVQKYGTSKVGLAVGPALFLWFCSLASIGIYNLVKYDNSVLRAFNPIHIYYFFKRNSTKAWYSLGGCLLSATGSEAMFADLCHFSVRSVQLSFVFLVLPCLLLGYLGQAAYLMENHADAGQVFFSSVPSGAFWPVFLIANVAALIASRAMTTATFSCIKQSTALGCFPRLKIIHTSRKFMGQIYIPVINWFLLGLSLVLVCTISSIDEIGNAYGIAELGVMMMTTILVTLVMLLIWQLHIIIVLSFVVVFLGLELTFFSSVLWSVTDGSWIILVFAIIMFLIMYIWNYGSNLKYETEVKRKLSTDLMRELGCNLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAIHSMIIFVSIKYVPVPMVPQSERFLFRRVCPKSYHIFRCIARYGYKDVRKENHQTFEQLLIESLEKFIRREAQERSLESDGDDDSDSEDEYPRSRVLIGPNGSVYSLGVPLLADYKDTSNPVLEASTSEVISSVFPDPSVCDAEQSLESELSFIHKAKECGVVYLLGHGDIRARKDSWFIKKLVINYFYAFLRKNCRRGITTLSVPHSNLMQVSMTYMV 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01970 840 Pfam K+ potassium transporter 96 668 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vian6g01970 840 MobiDBLite consensus disorder prediction 1 26 - -
Vian6g01970 840 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 90 838 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vian6g01970 840 NCBIfam potassium uptake protein 94 839 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vian6g01970 840 MobiDBLite consensus disorder prediction 695 718 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01970 Vian-Chr6 36826160 36831315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01970 9 840 Inorganic Solute Cotransporters AT5G09400 78.741 0.0 1316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01970 - - gmx:100788008 1487.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g02984 1 48990731 49010394 Vian6g01970 6 36826160 36831315 PCT