LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vian6g01941	ATGGTTAAGGCTCATTGGTCTTGGCCTTACCCACAGCACGTGGCTTGGCCATCACCTTACTTTAATAGCCCTTGCACCTCAGCAGAGCCCAGTTCGCTGGTTCGTTCAACATACATGAACTCTAGCACTTGCATCTTTCCTGCTGTCAGCATATTTCCCGGGTTCACAGCTCCTGCTATCCCAGATTTGAAGAGTGAGCAGACCAAGGAAGTGCAAGGATTCCTTCAGCATCCCAGTTTGGAACCATGTTTGAACGGAACACATACTGGAGAGGCTATGCAAAATGCATCTTTGCAGAAGAAGTTGCTTGTGTTTGACCACTCTGGTAGTAAGACAAGGTTGCTTTATAGTCCTGTCTTCCCTTTTGTCCAGAGTCCAATTGTTACCGCTACCCAATTTACTCAAGTTTATGATGTAAACGAAGAAGCACGGGCAACTAATATAGGTCTAAAGCATTGGCCCGTGTACACTTCTCCAGAAGAGACTGGTAAGGATCGTGTAGATAATGAAGAAAGTGAAATGCATGAAGACACAGAAGAAATCAATGCATTGCTTTATTCTGATGATTTTTATGATGATGATGATGGTGATGATGATGAGGTAACTAGCACAGGTCATTCTCCGTTGGTTACTGAAAAAACTTGTGTGATTCAAGAACAGTTTGTGGATATGAAGGAGGAAGTTGTTAGCACTGATTGGCCAAACAAAAGGCAGAAGTTAATTGATGGTGGATTCAATAGATTACCACCACTTGTGGAGAGTGCTAGTTCCGAAAGGCTAGATAAAATGTGTGAGTATGCCAGTGATGTTGAATCAAACTGTTCTAGTAGTGGTGGGGTGTATGCTACAAGGAAAACTAAAGATAACTCAACAGCTGTTGATATTCAATTGAAAAAGGATAAAATCCGTAAACTGGTGAGAGTTCTTGAGAACTTTATTCCAGGAGCAAAAGGAAAGCACCCCCTATTAGTCATCGATGGTACCATTGAGTACTTGGAATCTCTGATGTCCCAAACTGGTACACTGAAATATAACTAA	1038	0.42	MVKAHWSWPYPQHVAWPSPYFNSPCTSAEPSSLVRSTYMNSSTCIFPAVSIFPGFTAPAIPDLKSEQTKEVQGFLQHPSLEPCLNGTHTGEAMQNASLQKKLLVFDHSGSKTRLLYSPVFPFVQSPIVTATQFTQVYDVNEEARATNIGLKHWPVYTSPEETGKDRVDNEESEMHEDTEEINALLYSDDFYDDDDGDDDEVTSTGHSPLVTEKTCVIQEQFVDMKEEVVSTDWPNKRQKLIDGGFNRLPPLVESASSERLDKMCEYASDVESNCSSSGGVYATRKTKDNSTAVDIQLKKDKIRKLVRVLENFIPGAKGKHPLLVIDGTIEYLESLMSQTGTLKYN	345

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vian6g01941	345	PANTHER	TRANSCRIPTION FACTOR BHLH145	8	343	IPR037546	-
	Vian6g01941	345	MobiDBLite	consensus disorder prediction	156	175	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vian6g01941	Vian-Chr6	36624281	36625318	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vian6g01941	83	335	Basic Helix-Loop-Helix Transcription Factor Gene Family	AT5G09460	38.202	3.21e-27	107

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vian6g01941	-		-	gmx:100778385	528.48