Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01936 ATGGATGGTCACAGCGGAGGGACGAGAGGGGAGGCGGAGCGCTGGCTGTACACGGCGAACAAGGTTTTAAGTGCACGTGACTTGCACGGGGCTCGCTCATTTGCGATTCGGGCCCGAGAGTCCGACCCGAGATACGAGCCCACCCAGCTTCTTCTCACGGTTATCGATACCCTCATGGCCGGCGAGGCCCGGATCAACGACCACCTCGACTGGTACGCCATCCTCCAAGTCCTCCGTTACACTCAGAACATCGACTACATCGCCGTCCAGTACCGTCGCCTCGCCACCCAGCTCGACCCTCACCACAACCCATTTGCCTTCGCCGCTCACGCCTTCACGCTCGTCAACGACGCCTGGTCCGTACTCTCTAACTCCACAAAGAAAGCCTTCTACGACAACCAACTCAGACTCCTCACTCAACCCCCACCCCCTCCTCCTCCTCCTCCGCCTCCTCCACCGCCGCCGCAACCTCCCGCTCCTCCGGTTACCTTCTTCCCGATTCAACCTCCGCAACCAAACTTAAACCCGAACCCGACCACGACCCCTTACCAAGTCCCTCAGCGGGAAAAAAGCCCTAGGGCTTGGGTGGAGGTGGAAGTGGAGGTGCCGAGTCAGGAGGACAATGCGAGCGAGTTGACTCGGGCGAGTGAGACGGAGAGCGAAGGGGCGAGTTTCTGGACCGCGTGCCCTTATTGTTACGTTATGTACGAGTATCCGAAGGTGTACGTGGATTGTACGTTGCGGTGTCAGAGTTGTCGGAGGGGGTTTCATGCGGTGGTGGTACGGTCGCCGCCGAAAGATGGTTTTGGCTCGTTTTGCAGTTGGGGTTTTTTCCCTGTGGGATTTTCTGGAGATTTTAGAGACATCAGCGGTTCTTCTTCGAAGTGGAACCCTTTTTCCCCTTTGATTCCTTGCGCTTTCAAAAGGGAGGTGCAGCAGAGTAGGAAGCACCATAAGGCGCCTTATGTATTCTACGACGATGACGCGTCTGCGGAGTTCGCGGAGGGTTCCGACACGACGAAGGATGATTCCGACGATGATGATTGGCATGGCGGGAATCAGAAGGGAATGGAGACGGTGGCGAAGAAGAGGACGAGGAAGAGGGGGAGGAAGAGGGGGAGGAAGAGAAGAAATGGTAATGGTGGTGATGTCAGGAGGGAACCGATTGAGAGGCCTAGGAGAGGCGTTCATAGTCATACTGGTGGTGATGAGGGGAATGTTAACGGAAATGTGGAGAATGGTGAGGTTGCGGATGGTGAAGGTGATGGTGTTGCGGCGGCGGCAGATTCTGGTAAGAAGGGTGAGTTGGGTGGTTCTCGGAGGAGGAGTGAGAGGAACTTGGGGAAGTTAGATTTGAATGTAGAGTTCAGCAATGAGGTGGAGGAGTCTTTGCATGAAGTGGATGAAGGGAATGAAAATGGGAATGGGAATGCTGAGGATAATATTGAAGGGATTGGATTTTTTGAAGGGCTGGACGAGTTCCTCAGTAGCTTGCCCATTCTGAATGCTGTTGCAGATGACAAGGTTAAGGGTCATTAG 1539 0.551 MDGHSGGTRGEAERWLYTANKVLSARDLHGARSFAIRARESDPRYEPTQLLLTVIDTLMAGEARINDHLDWYAILQVLRYTQNIDYIAVQYRRLATQLDPHHNPFAFAAHAFTLVNDAWSVLSNSTKKAFYDNQLRLLTQPPPPPPPPPPPPPPPQPPAPPVTFFPIQPPQPNLNPNPTTTPYQVPQREKSPRAWVEVEVEVPSQEDNASELTRASETESEGASFWTACPYCYVMYEYPKVYVDCTLRCQSCRRGFHAVVVRSPPKDGFGSFCSWGFFPVGFSGDFRDISGSSSKWNPFSPLIPCAFKREVQQSRKHHKAPYVFYDDDASAEFAEGSDTTKDDSDDDDWHGGNQKGMETVAKKRTRKRGRKRGRKRRNGNGGDVRREPIERPRRGVHSHTGGDEGNVNGNVENGEVADGEGDGVAAAADSGKKGELGGSRRRSERNLGKLDLNVEFSNEVEESLHEVDEGNENGNGNAEDNIEGIGFFEGLDEFLSSLPILNAVADDKVKGH 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01936 512 MobiDBLite consensus disorder prediction 138 179 - -
Vian6g01936 512 CDD DnaJ 70 124 IPR001623 -
Vian6g01936 512 Gene3D DnaJ domain 59 140 IPR036869 -
Vian6g01936 512 ProSitePatterns Nt-dnaJ domain signature. 112 131 IPR018253 -
Vian6g01936 512 SUPERFAMILY Chaperone J-domain 64 136 IPR036869 -
Vian6g01936 512 MobiDBLite consensus disorder prediction 434 469 - -
Vian6g01936 512 Pfam DnaJ domain 70 132 IPR001623 -
Vian6g01936 512 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 383 - -
Vian6g01936 512 SMART dnaj_3 69 127 IPR001623 -
Vian6g01936 512 MobiDBLite consensus disorder prediction 380 400 - -
Vian6g01936 512 MobiDBLite consensus disorder prediction 334 481 - -
Vian6g01936 512 MobiDBLite consensus disorder prediction 136 185 - -
Vian6g01936 512 MobiDBLite consensus disorder prediction 334 360 - -
Vian6g01936 512 ProSiteProfiles dnaJ domain profile. 70 135 IPR001623 -
Vian6g01936 512 MobiDBLite consensus disorder prediction 361 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01936 Vian-Chr6 36590327 36591865 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01936 11 511 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 37.354 5.27e-90 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01936 - - gmx:100778926 633.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03026 1 49950462 49952006 Vian6g01936 6 36590327 36591865 PCT