Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01867 ATGCCTCATGAGTATGCAGTAAACGGGATTCTTTCCCTGAAGTCTGATGTATATAGCTTCGGAGTTATAGTGTTAGAGATACTAAGCGGGATCAGAAGTAGTAACTACAAAGTCAAGCATCCAGATCATGATCACAATCTGATGGGGCAGGCATGGACATTATGGAAAGATGGACGAGCTGTGGGATTTATGGATGTTAATTTAGACCTTACAGTGGTTCCATCAGAATTACTAAGGTGTCTGCAAGTTGGTCTCTTGTGTGTTCAAAAGTTACCTGAAGATAGACCAACTATGTCTTCTGTTGTTTTTATGTTGAGCAATGAAAGCATTGTTCTTCCCCAACCAAAGAAAACTGGTTTCTTTGAAGAAGAGTCAGAGTATCATCATGCGTACAGCGAGAATGAGAGTTTTAGTAACAATGCTATGACTATAACTCTATTAGAAGCTCGAAGTTAG 456 0.3947 MPHEYAVNGILSLKSDVYSFGVIVLEILSGIRSSNYKVKHPDHDHNLMGQAWTLWKDGRAVGFMDVNLDLTVVPSELLRCLQVGLLCVQKLPEDRPTMSSVVFMLSNESIVLPQPKKTGFFEEESEYHHAYSENESFSNNAMTITLLEARS 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01867 151 Pfam Protein tyrosine and serine/threonine kinase 1 102 IPR001245 GO:0004672|GO:0006468
Vian6g01867 151 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 150 - -
Vian6g01867 151 SUPERFAMILY Protein kinase-like (PK-like) 2 132 IPR011009 -
Vian6g01867 151 Gene3D Transferase(Phosphotransferase) domain 1 1 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01867 Vian-Chr6 36019499 36020074 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01867 1 146 Receptor kinase-like Gene Family AT4G23150 38.356 1.88e-32 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vian6g01867 PK_Tyr_Ser-Thr 2.1e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01867 - - vra:106774971 283.493