Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01854 ATGTCCCTCGAGACCCCAATGGCCAAAACGTTACAGATAATCCCCAAGCCAGACCACGGTCAAGTCAAGCGAGACGTTTCTGACACCCTTCCCTTCTTCATCATCATAGGGAACCGGTCAAAGGGAATAAGATCAACCAGAGGACCACTTACACTCGATGCAAATGACCGAGATATAACTGCATTGTGCAGGCATCCCATTATAAAAGATATCAAGAAAGGGAAGATGGAGTTTGATCTTGAAGACCCACTAGTCAGCTTGGAAGAAGAGCAACCCTTTACTGTATCAGAACTCTTTGCCTCCGAATCAGATCACATGCCCTCACCAAACTACTTAAGTCTAACACATTTTCACGTTTTCTGTTTTGAGGCCATATCTCTTATTCTTCAGGTTCAGCTTTCTTACAAACTAGACCCTTTTGTAGCTTACCTTGCTATAAATTACATGCACCGTTTCACGTCAAGCCAGGAAATTCCGAAGGGGAATCCGTGGTATCTTAGGCTTGTTGTCGTATCGTGTCTCTCTCTTGCTTCAAAGATGAAAAACACAACTTTGCCATTTTTGGAAATGCTGAAAGAAGCTGAAATTGATGACCACTCACTGAAGCAAGCACTCAAAGAGAGGGCTTCTGCTATAATCTTCAATGCTCAAAATGACATTAAGCTTTTAGAGTATAAGCCTTCAACTATTGCAGCAACTGCCCTCATCATTGCATCGCATGAACTACTCCCTCATCAATATTCTATTCTGAGAGCTTCAATTATATCCAGTGAGTACCTAGATGAGGAGACATTGTCCAAGTGCTTTGATTTGATGCAAGAGATGATAAGAACGGTAGCAAAAGAGTTAGACACAGAAAGATGCTTTTTAAGAACAGAAACTCCAGGGAGTGTGCTTGAGAGAAACACCAAACGACAAAGAATTTAA 927 0.4175 MSLETPMAKTLQIIPKPDHGQVKRDVSDTLPFFIIIGNRSKGIRSTRGPLTLDANDRDITALCRHPIIKDIKKGKMEFDLEDPLVSLEEEQPFTVSELFASESDHMPSPNYLSLTHFHVFCFEAISLILQVQLSYKLDPFVAYLAINYMHRFTSSQEIPKGNPWYLRLVVVSCLSLASKMKNTTLPFLEMLKEAEIDDHSLKQALKERASAIIFNAQNDIKLLEYKPSTIAATALIIASHELLPHQYSILRASIISSEYLDEETLSKCFDLMQEMIRTVAKELDTERCFLRTETPGSVLERNTKRQRI 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01854 308 SMART cyclin_7 126 210 IPR013763 -
Vian6g01854 308 SUPERFAMILY Cyclin-like 212 292 IPR036915 -
Vian6g01854 308 Pfam Cyclin, N-terminal domain 99 191 IPR006671 -
Vian6g01854 308 PANTHER CYCLINS 125 277 IPR039361 -
Vian6g01854 308 Gene3D - 122 216 - -
Vian6g01854 308 CDD CYCLIN_AtCycD-like_rpt2 196 272 - -
Vian6g01854 308 SUPERFAMILY Cyclin-like 95 191 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01854 Vian-Chr6 35930141 35933025 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01854 76 301 Core Cell Cycle Gene Families AT4G03270 30.357 1.12e-26 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01854 K18812 - gmx:100799985 340.887