Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01832 ATGCAGACGAGGTACATGGAGAAATCGAGCAGCGCGGCGAGGGGGAAGCGCGGCTTAGATTCAGGCTCCACCGAAGAAGAACAACCTGAAAAAAAGCGACCTGCTCTTGCTAGCGTTATTGTTGAAGCCCTCAAGGTGGATAGTCTGCAGAAACTTTGTTCATCACTGGAGCCTATTCTTCGTAGAGTTGTTAGCGAAGAAGTAGAGTGTGCTTTAGCAAAATTAGTCCCTGTCAAGCTTAGTGGAAGGTCTTCTCCCAAGAGCATAGAAGGCCCTATTGACAGCAGTCTACAGTTACAATTCAGGAACAGGTTATCCCTTCCCCTCTTTACTGGTGGGAAAGTGGACGGAGAGCATGGCAGCGCCATACACATTGTTTTGATTGATACAATAACAGGCCATGTTGTTACATCTGGCTCAGCTTCGTGTGTCAAACTAGACGTTATTGTACTTGAAGGAGATTTCAATAACGAGGATGATGATAATTGGAGTGAAGAAGATTTTGATAGTCACGTAGTTAAAGAGCGGGAAGGAAAAAGACCTCTTCTGGCTGGTGATCTGCAAGTGACGCTGAAGGAGGGTGTAGGAACATTGGGTGAGCTTACATTTACAGACAACTCTAGTTGGATAAGGAGTAGGAAGTTCAGGCTGGGGCTCAAAGTTTCCTCAGATTGTTATGAGGGAATGCGTATTCGTGAAGCCAAAACAGAGGCTTTCACCGTTAAGGATCATCGTGGAGAATTATACAAGAAGCATTACCCACCTGCCTTGAATGATGAGGTCTGGAGACTGGAGAAGATTGGAAAGGATGGTTCATTTCACAAAAGGTTAAATAAAGCAGGAGTATATACAGTTGAAGATGTCGTACGACTTGTGGTCAGAGATCCACAGAGATTGCGGAATATTCTCGGGAGTGGTATGTCAAATAAAATGTGGGATGTTCTTGTTGAGCATGCAAAGACTTGTGTTCTCAGTGGAAAACTCTATGTATATTATCCCGATGGTGCAAGGAATGTTGGTGTTGTTTTCAATAACATCTATGAGTTGAGTGGTCTAATTACCAATGACCAATATTACTCTGCTGATTCTCTCTCAGACAGTCAAAAGGTTTATGTGGACACACTGGTGAAGAAGGCATATGAGAATTGGATGCATGTTATTGAGTATGATGGCAAGTCTCTGCTAAGTGCCAATCAGAATATGACTTTGGGCACCTCCCATCCTCTAGCTGCAGGGGGTTCCCATGATTATTCAATTTCAAACTCCCTTGATCAGCAGACCTGCATCCCAAGTCTACCAGTTCCTGCAACTACTGGGCAGCCTTCAATGGATCCAGCCATAGCAGTCGGAGGTTATCATAATGTGACGACTACCAGATCCTCAATGCAACCACAGAATGACAATCTTCATTCTTCTATTCAGTTTGATAACACACTCCCACTGCAAAACCAGATACTGAATGCTTCACACCAATCTCAACTTCCTAGAAATGAAAATGAGATGACTCTTGGTTCACGACAACCAGCTACTCCGGGCTTTCAAAGTGTCGGCATTTCAAATCCTAGTTATAGAGGATTTGAGGACTACTTTCCAGAGGAGGAGATTCGAACTAGAAGTCATGAGATGCTAGAAAATGAAGACATGCAGCATTTGCTTCGTATATTTAATATGGGAGGCGGGCAATCCCATGCTTCCTTCAATACCCCAGAAGATGCATACCCTTATCCATCATCTACTTACATGCCTGCGACCTCCATGAGCTACCACTTAGATGATGAACGAAACCGTTCCTCGGGAAAGGCTGTTGTGGGCTGGCTTAAGCTTAAGGCAGCTTTGAGATGGGGCATTTTTATTCGGAAGAGGGCCGCTGAGAGACGGGCACAACTTGTTGAGTTGGATGACCCGTAG 1908 0.4455 MQTRYMEKSSSAARGKRGLDSGSTEEEQPEKKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVECALAKLVPVKLSGRSSPKSIEGPIDSSLQLQFRNRLSLPLFTGGKVDGEHGSAIHIVLIDTITGHVVTSGSASCVKLDVIVLEGDFNNEDDDNWSEEDFDSHVVKEREGKRPLLAGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVSSDCYEGMRIREAKTEAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGVYTVEDVVRLVVRDPQRLRNILGSGMSNKMWDVLVEHAKTCVLSGKLYVYYPDGARNVGVVFNNIYELSGLITNDQYYSADSLSDSQKVYVDTLVKKAYENWMHVIEYDGKSLLSANQNMTLGTSHPLAAGGSHDYSISNSLDQQTCIPSLPVPATTGQPSMDPAIAVGGYHNVTTTRSSMQPQNDNLHSSIQFDNTLPLQNQILNASHQSQLPRNENEMTLGSRQPATPGFQSVGISNPSYRGFEDYFPEEEIRTRSHEMLENEDMQHLLRIFNMGGGQSHASFNTPEDAYPYPSSTYMPATSMSYHLDDERNRSSGKAVVGWLKLKAALRWGIFIRKRAAERRAQLVELDDP 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01832 635 Pfam Calmodulin binding protein-like N-terminal domain 97 244 IPR046831 -
Vian6g01832 635 PANTHER OS02G0177800 PROTEIN 14 548 IPR012416 GO:0005516
Vian6g01832 635 MobiDBLite consensus disorder prediction 10 32 - -
Vian6g01832 635 Pfam Calmodulin binding protein C-terminal domain 327 389 IPR046829 -
Vian6g01832 635 Pfam Calmodulin binding protein central domain 256 322 IPR046830 -
Vian6g01832 635 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01832 Vian-Chr6 35759439 35764223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01832 14 630 Calmodulin-binding Proteins AT5G57580 59.133 0.0 740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01832 - - gmx:100802994 1141.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03141 1 52448803 52453848 Vian6g01832 6 35759439 35764223 PCT