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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vian6g01805
ATGGGGTTGAGTTCTAAGCAGGTTTCTAATAGAGGGCTTGATTGGGACCAGACTTTGTTGCAGGCTCAAAACTTGGAGCTCCCAAAGCCTACTCCTATGAGGAAACAGCAGCAACAGACTCAGCCATCAGAGCCTTTGAATTGTCCAAGATGTGACTCCATTAACACCAAATTCTGTTACTACAACAACTACAACAAGTCTCAACCCCGCCATTTCTGCAGAGCTTGCAAGAGGCACTGGACTAAAGGTGGAACTCTGCGCAACGTTCCTGTTGGCGGTGGTAGAAAGAATAAGCGAGCCAAGAAATCGACCACAGCTACAACCACCACCTCAAATGGAAGCATGGATGGTGAGTTGAGAACCCGCGTTACAATTCCTCCTCTTGCAGTGGATGATCATCACAAAACCACACCTTCCTCTCTCTACCAATCTCTGTGCCTGCCACAACAGAATCCGAATACCAAAGTTTCCCAAGGCAAGGACTTTGGTATTGGCAATGGAATCTTTCTGAGTTCAAACGTGCCTTTTCCTCAAAACCAAAGCCTTCTCTTCCCTTTCACAACCTCAAACTCCTTTGACACAAACACGTGTGCAGTATCCAACTCTCTGCAATCCTCCAGTGTGTATAACTACGGTGACGAGTTTAAAATACTGGAAGAGCCAACCGTGAACAGTACAATGGCCTGCACTGGTGCTGGCACCAGGACACAACCATGGGAGATCGCAGCGACAAGTTCTGGTTTGGAAATGTCAAACTATTGGAGTTGGGAGGACATCGATTCGTTGGTCTCAACCGATCCAAATAATCCTTGGGATGATTCCGACATCAAACCCTGA
837
0.4707
MGLSSKQVSNRGLDWDQTLLQAQNLELPKPTPMRKQQQQTQPSEPLNCPRCDSINTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRAKKSTTATTTTSNGSMDGELRTRVTIPPLAVDDHHKTTPSSLYQSLCLPQQNPNTKVSQGKDFGIGNGIFLSSNVPFPQNQSLLFPFTTSNSFDTNTCAVSNSLQSSSVYNYGDEFKILEEPTVNSTMACTGAGTRTQPWEIAATSSGLEMSNYWSWEDIDSLVSTDPNNPWDDSDIKP
278
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vian6g01805
278
MobiDBLite
consensus disorder prediction
103
118
-
-
Vian6g01805
278
MobiDBLite
consensus disorder prediction
84
118
-
-
Vian6g01805
278
ProSitePatterns
Zinc finger Dof-type signature.
48
84
IPR003851
GO:0003677|GO:0006355
Vian6g01805
278
ProSiteProfiles
Zinc finger Dof-type profile.
46
100
IPR003851
GO:0003677|GO:0006355
Vian6g01805
278
PANTHER
DOF ZINC FINGER PROTEIN DOF1.4-RELATED
34
197
IPR045174
GO:0003700|GO:0006355
Vian6g01805
278
Pfam
Dof domain, zinc finger
45
99
IPR003851
GO:0003677|GO:0006355
Vian6g01805
278
MobiDBLite
consensus disorder prediction
26
47
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vian6g01805
Vian-Chr6
35510530
35511366
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vian6g01805
29
133
C2C2-Dof Transcription Factor Family
AT5G60200
50.000
3.57e-30
112
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
C2C2-Dof
Vian6g01805
zf-Dof
1.5e-31
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vian6g01805
-
-
vra:106774613
520.776
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