Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01767 ATGGGAAAAGCATTCGACGTGGGAGCCGTTCCGTTCAACTCCGACGGCTGGGGACCACCGGAAACAGCGGCCGCCGGCGGTAGCAGCAACCTTCCTCTCAACGTTCCCTTTGCCCCCTTCTCCCGTTCTGACAAATTGGGCCGCATCGCCGACTGGACCCGCAATTTCAACAACCCGACCCGCTCCAAGAACCCCGCAGATTCCGTCTTCGACTTCACCAACGATGACTCCTTCCCGGCCTCCGCTGACGACGACGCCTCATTCCGCCTCGTCGATGGCAAGCCTCCACCGCGCCCCAAATTCGGCCCTAAGTGGCGTTTCCAGCAGCAGCGTCAGCTTCCGCAGCGCCGCGACGAGGAGGTCGAAGCCCGAAAACGCGAACAGGAGAAGGAACGCGCACGTCGCGATAGGCTATACCACATGAACCGCTCAAACCCTAATGCGCCGCGTCGTGAAGCCGCTGTTTTCAAATCCTCTGTGGATATCCAACCGGAATGGAACATGCACGACCAGATCCCCTTCTCCACGTTCTCTAAACTCTCCTTCACCGTTCCCGAGCCTGAAGACCTTCTCCTCTGTGGTGCTCTCGAATACTACGATCGTACCTACGATCGCATCACACCCAAAAACGAACGCCGCCTGGAACGTTTCAAGAATCGGAACTTCTTCAAGGTCACCACTACTGACGACCCTGTTATACGCAGACTCGCGAACGAGGACAAAGCCACTGTTTTTGCCACCGACACTATTCTCTCCACTCTCATGTGTGCCCCAAGGTCTGTATATTCGTGGGATATTGTCGTTCAGCGCGTTGGGAACAAGCTTTTCTTTGATAAGCGTGATGGGTCGCAGCTTGATTTGCTTTCCGTTCACGAGACCTCTCAGGAGCCACTGCCTGAGGCTAAGGATGATATTAACTCTGCTCATTCGTTGAGCGTTGAGGCTGCCTATATTAACCAGAACTTCTCGCAGCAGGTTCTGATCAGGGATGGGAACAAGGTTACTTTTGATGAGGCTAATCCTTTTGCTAACGAGGGTGAGGAGGTTGCTTCTGTGGCTTATAGGTATAGGAGGTGGAAGCTTGATGATGATATGTATCTTGTTGCGAGGTGTGAGGTGCACAGTGTGGTTGATGTGAATAAGCAGCGGTCGTTCCTTACTTTGAATGCTTTAAATGAGTTTGATCCTAAGTATTCGGGTGTGGATTGGAGGCAGAAGTTGGAGACTCAGAGGGGTGCCGTGTTGGCCACTGAGCTTAAAAACAATGCGAATAAGTTGGCTAAGTGGACTGCTCAGGCTCTTTTGGCTAGCGCGGATATGATGAAGTTGGGGTATGTGTCTAGGATTCATCCCCGTGATCATTTTAATCATGTGATTTTGGCTGTGGTAGGGTATAAGCCCAGGGACTTTGCAGCACAGATCAATTTGAATACTGCTAATATGTGGGGTATTGTGAAGTCTATAGTTGATTTGTGCATGAAATTGAACGAGGGAAAATATGTCCTTGTGAAGGATCCGTCCAAACCTCAAGTTAGGATCTATGAGGTTCCGGCTGATGCGTTTGAAAATGATTATGTGGAGGAGCCACTTCCGGAGGATGAACAAGCTCAGCCTCCGGCGGAGGGTACTGAGGAGGCAGAAACTGGTACCACCAATGATGTGGAAGATAAGCAGATAGACGTTCAAGCTTGA 1692 0.5142 MGKAFDVGAVPFNSDGWGPPETAAAGGSSNLPLNVPFAPFSRSDKLGRIADWTRNFNNPTRSKNPADSVFDFTNDDSFPASADDDASFRLVDGKPPPRPKFGPKWRFQQQRQLPQRRDEEVEARKREQEKERARRDRLYHMNRSNPNAPRREAAVFKSSVDIQPEWNMHDQIPFSTFSKLSFTVPEPEDLLLCGALEYYDRTYDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFATDTILSTLMCAPRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPEAKDDINSAHSLSVEAAYINQNFSQQVLIRDGNKVTFDEANPFANEGEEVASVAYRYRRWKLDDDMYLVARCEVHSVVDVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADMMKLGYVSRIHPRDHFNHVILAVVGYKPRDFAAQINLNTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPEDEQAQPPAEGTEEAETGTTNDVEDKQIDVQA 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01767 563 MobiDBLite consensus disorder prediction 54 136 - -
Vian6g01767 563 MobiDBLite consensus disorder prediction 111 136 - -
Vian6g01767 563 MobiDBLite consensus disorder prediction 1 32 - -
Vian6g01767 563 PIRSF Transl_init_eIF3d 1 545 IPR007783 GO:0003743|GO:0005737|GO:0005852
Vian6g01767 563 Hamap Eukaryotic translation initiation factor 3 subunit D [EIF3D]. 3 527 IPR007783 GO:0003743|GO:0005737|GO:0005852
Vian6g01767 563 Coils Coil 116 136 - -
Vian6g01767 563 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 7 515 IPR007783 GO:0003743|GO:0005737|GO:0005852
Vian6g01767 563 MobiDBLite consensus disorder prediction 54 75 - -
Vian6g01767 563 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 4 538 IPR007783 GO:0003743|GO:0005737|GO:0005852
Vian6g01767 563 MobiDBLite consensus disorder prediction 524 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01767 Vian-Chr6 35148573 35150264 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01767 1 560 Eukaryotic Initiation Factors Gene Family AT4G20980 77.645 0.0 924
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01767 K03251 - gmx:100799613 1047.34