Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01755 ATGGCGTCTTCTTCTTCTTCGGGCTCTCGCGAGGGGCACTACAGAGGCGTCAGGAAGCGACCCTGGGGACGCTACGCCGCCGAAATACGTGACCCGTGGAAGAAGACACGTGTCTGGTTGGGCACATTCGATACTCCCGAGGAGGCCGCCCTCGCCTACGACGGCGCCGCCCGTTCTCTCCGCGGCGCCAAGGCCAAGACCAACTTCCCCCCGTCTCCCGCCCTCTGCCTCGACCTCAACGCCCCTTCTTCCGATCACCGCTGGCCCAACGTCCCCTCCCGTACCCTCGTCCTCACCGAGTTCCTCCACACCGCCGTTCTCAAAGACATCGAACCGCCACAGCCTCTTCCCCCTGCCACCACCGCTCTCCGCCGCCCCGACGCCGGCGTTCCTCTCGGTGGCGGAGTTCAGGTGGTGGAGAGCTCCCCGACGGCGTCGTTTTTGGGACTCGTTCGGCGCGGGATCCCCATCGACTTGAACGAGCCTCCACCGCTGTGGCTATGA 504 0.6587 MASSSSSGSREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGAKAKTNFPPSPALCLDLNAPSSDHRWPNVPSRTLVLTEFLHTAVLKDIEPPQPLPPATTALRRPDAGVPLGGGVQVVESSPTASFLGLVRRGIPIDLNEPPPLWL 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01755 167 FunFam Ethylene-responsive transcription factor 2 13 71 - -
Vian6g01755 167 ProSiteProfiles AP2/ERF domain profile. 13 70 IPR001471 GO:0003700|GO:0006355
Vian6g01755 167 SUPERFAMILY DNA-binding domain 13 71 IPR016177 GO:0003677
Vian6g01755 167 Gene3D AP2/ERF domain 13 71 IPR036955 GO:0003700|GO:0006355
Vian6g01755 167 Pfam AP2 domain 13 62 IPR001471 GO:0003700|GO:0006355
Vian6g01755 167 CDD AP2 13 72 IPR001471 GO:0003700|GO:0006355
Vian6g01755 167 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 9 86 - -
Vian6g01755 167 PRINTS Ethylene responsive element binding protein signature 36 52 IPR001471 GO:0003700|GO:0006355
Vian6g01755 167 PRINTS Ethylene responsive element binding protein signature 14 25 IPR001471 GO:0003700|GO:0006355
Vian6g01755 167 SMART rav1_2 13 76 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01755 Vian-Chr6 34996944 34997447 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01755 4 167 AP2-EREBP Transcription Factor Family AT1G28360 51.010 3.06e-45 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Vian6g01755 AP2 2.4e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01755 - - gmx:100798369 279.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g01755 6 34996944 34997447 Vian6g01755 6 34996944 34997447 ECH