Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01737 ATGACATGGTGTAATGACTCTGATGAGGAGAAGAGGATTGAATCAATGATTGTTACCCAAAAGACCAGTGTCACTGACATAAAACTCCACGAAGAAATTCGAACTGTAACATGCCCCTCCTGCGGCCATAACATTGAATTCAAAGATCAGGGTGGAATTCATGACTTGCCGGGGTTACCAGCTGGAGTGAAATTTGACCCAAATGACCAAGAAATACTAGAGCATTTAGAGGCAAAAGTGGGATCGGATGCATGCAAGCTTCATCCTCTTATTGATGAGTTCATACCAACTCTTGAAGGGGAGAATGGGATTTGTTCTACACACCCAGAAAAACTACCAGGAGTGGGCAAAGATGGACAGATCCGCCACTTCTTTCACAGGCCATCAAAAGCATACACAACTGGAACAAGGAAAAGAAGAAAGGTTCACACAGATGAAGAAGGAAGTGAAACAAGATGGCACAAAACGGGAAAAACTAGAGCTGTTTTTGCAGCTGGTGGTGCTGTGAAGGGCTTTAAAAAAATACTAGTACTCTACACCAACTATGGCAGGAAAAGGAAGCCTGAGAAGACTAATTGGGTGATGCATCAATATCATCTTGGCAGCACTGAAGAAGAGAAAGATGGAGAATTAGTTGTTTCAAAGATCTTCTATCAGACACAACCCAGACAATCCGGTAATAATCCCAATATCATAGAGGAGCCGTACGAGAAAATGTTGAATGCTGATTTTAGGGGCCACAACAACAATACATCAATACCTAAAACTACAACTATGGTGGATTGCTACAATGTTCCTTACATAAATTATGATGATGTCCATTCACAACTAATTATTCCCAGCTCGGTTGTTGCAGCTGATGACTCTTACATTCGCTATGCAATGGATGCAAAGAAAGCAAGATTTGAAACTAACACTGGGAAGAGTTTCTAG 933 0.4137 MTWCNDSDEEKRIESMIVTQKTSVTDIKLHEEIRTVTCPSCGHNIEFKDQGGIHDLPGLPAGVKFDPNDQEILEHLEAKVGSDACKLHPLIDEFIPTLEGENGICSTHPEKLPGVGKDGQIRHFFHRPSKAYTTGTRKRRKVHTDEEGSETRWHKTGKTRAVFAAGGAVKGFKKILVLYTNYGRKRKPEKTNWVMHQYHLGSTEEEKDGELVVSKIFYQTQPRQSGNNPNIIEEPYEKMLNADFRGHNNNTSIPKTTTMVDCYNVPYINYDDVHSQLIIPSSVVAADDSYIRYAMDAKKARFETNTGKSF 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01737 310 SUPERFAMILY NAC domain 53 219 IPR036093 GO:0003677|GO:0006355
Vian6g01737 310 ProSiteProfiles NAC domain profile. 59 219 IPR003441 GO:0003677|GO:0006355
Vian6g01737 310 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 19 249 IPR044799 GO:0003700
Vian6g01737 310 Gene3D NAC domain 68 223 IPR036093 GO:0003677|GO:0006355
Vian6g01737 310 MobiDBLite consensus disorder prediction 138 153 - -
Vian6g01737 310 MobiDBLite consensus disorder prediction 132 153 - -
Vian6g01737 310 FunFam NAC domain-containing protein 73 68 223 - -
Vian6g01737 310 Pfam No apical meristem (NAM) protein 60 200 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01737 Vian-Chr6 34835345 34838245 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01737 1 228 NAC Transcription Factor Family AT4G28500 71.179 2.08e-119 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vian6g01737 NAM 3.2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01737 - - gmx:100809389 508.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g01737 6 34835345 34838245 Vian6g01737 6 34835345 34838245 ECH