Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01734 ATGGGGTTGATCGATCTGAACACCACCGAGGATGATGAAGCTCCATTATCCGCTTCTTCTTCTTCTGCCGCTTCATCTTCTTCTTCTCACTCCGGGATAAGCACTTCTGCTTCCACCTTGGTTGGTCCTCCTCCTCCTCCGCCTCCTCCTCCTTCTTCCGTCTGCTTGGAACTGTGGCACGCATGTGCGGGACCTTTGATCTCTCTGCCGAAGAAAGGAAGTGTTGTTGTGTACTTGCCACAGGGACACTTTGAGCATGTTCAGGATTTTCCGGTCACTGCTTATGATATCCCAGCCCATATCTTCTGTCGTGTTCTTGATGTCAAGCTCCATGCGGAGGAAGGGAGCGATGAAGTGCAGTTTGGGTCTGGGAAGCTTGCAGAAAGAAAGGCATCTCAATCTGTCCTAGTCTTTCGGCAAGTGGAGCAAAGGTTGCGTGAAGGCCAAATTGAAGCTGATGGGGAAGAGGAGGACACTGAAGCAATGGTGAAGTCAACAACTCCCCATATGTTCTGCAAGACTCTCACAGCTTCAGACACTAGCACTCATGGTGGATTTTCAGTGCCTCGCCGAGCAGCTGAAGATTGCTTTCCTCCTCTGGATTACAGTCAACAGAGACCTTCACAGGAGCTCGTGGCTAAGGATCTTCATGGCCTGGAGTGGAGGGGCGACGATGGAGAACTGAGATTAGGGATTCGTAGGGCAGCCCAGTTGAAAGGTTCTGGTTCCTTTGCAGTACCTACTGGTCAGCAATTGAATCCTGGAACTTTCATGGATGTTGTTAATGCATTATCTACAAGATGTGCTTTTAGTGTTTGCTACAATCCAAGGTTTAGCTCTTCAGAATTCATCATACCTGTTCACAAATTCTTAAAGAGTCTTGATTGTTCTTATTTAGTTGGAATGAGGTTCAGGATGCGTTTTGAAACAGAAGATGCTGCAGAGCGGAGGTTTACTGGATTAATTGCTGGAATCAGTGATGTCGATCCAGTTAGATGGCCTGGATCGAAATGGAGATGCCTACTGGTAAGGTGGGATGACATGGAAGCTGCTAGGCACAATAGGGTTTCCCCATGGGAAATTGAGCCATGTGGTTCTGCTTCAAGTTCCAGCAACATGATGGCAGCTGGTTTGAAGAGGACCAGGATTGGAATGACTTCAACGAAGATGGAATTTCCTTCTCCCAATGGGATTGGAACATCAGACTTTGGGGAATCATTAAGGTTCCGGAAGGTCTTGCAAGGTCAAGAAATTTTGGGTGTTAATCCTCCCTTTGATGGTATTAATGCTCAGAGTCCCCGGTTATATGACTTAGGGAGGTACTATATTGGTCCAAACTGTCCCGGGATTCCCCCAACGGGAAATAACATCAGAATGCAGCATGCAGCATCTGATTTTTCCTGCAATGGCACAGGCTTTAGTGAATCTTTCCGGTTCCAGAAGGTCTTGCAAGGTCAAGAAATTCTTCCAAGTCAACCATATGGAAGAGCATTGTCAATAGAGGAGGCTCGAGCTAATGGTCGCTTGGGACATTTTGATGGTTATCAGTTGCTTAACTCCAGAAATGGGTGGTCTGTACAGATGCATGACAATGCTCCGCATTTGCATGCATCCGTTACACCTTCACAGGTGTCATCTCCATCATCTGTGTTAATGTTCCAGCAAGCAGTTAATCCAGTTTCTAACAGTGATTATAATAATAAGAAACATAGTAAGATGTACCAAGGTTTATGCGCATCTGAAGTGAAAGCTAGAACATTTGCATCTCCCCCATCTGATGATCTTACTTTCTCTAGGCGAGCTCCGGAAAGGGCTAGTTCTTTAGGTATGTTTGATGTTCGTAATCAGTTGGGTAGTTCACAGTCACACAATTCTGTGTCGGCCCTGAGAAACAATCAAGAGTTGGTTTCCTCATGTAAAAGTAGTTGTAGACTCTTTGGTTTTTCATTGACTGAGAACACACATGTTGCAACCAAAGAGGTTGATGCCTCTACCATCACTTTACCAATTAATGCTGGACCTTCCTTTACTAGAATTGTTGAAGATGAGTTTCATCCTAGCAGGACACTCCAGAGCAAGGCGGTTGGAAGTAACTGCACAAAGGGTGTGTTGCAGTATTGA 2121 0.4578 MGLIDLNTTEDDEAPLSASSSSAASSSSSHSGISTSASTLVGPPPPPPPPPSSVCLELWHACAGPLISLPKKGSVVVYLPQGHFEHVQDFPVTAYDIPAHIFCRVLDVKLHAEEGSDEVQFGSGKLAERKASQSVLVFRQVEQRLREGQIEADGEEEDTEAMVKSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWRGDDGELRLGIRRAAQLKGSGSFAVPTGQQLNPGTFMDVVNALSTRCAFSVCYNPRFSSSEFIIPVHKFLKSLDCSYLVGMRFRMRFETEDAAERRFTGLIAGISDVDPVRWPGSKWRCLLVRWDDMEAARHNRVSPWEIEPCGSASSSSNMMAAGLKRTRIGMTSTKMEFPSPNGIGTSDFGESLRFRKVLQGQEILGVNPPFDGINAQSPRLYDLGRYYIGPNCPGIPPTGNNIRMQHAASDFSCNGTGFSESFRFQKVLQGQEILPSQPYGRALSIEEARANGRLGHFDGYQLLNSRNGWSVQMHDNAPHLHASVTPSQVSSPSSVLMFQQAVNPVSNSDYNNKKHSKMYQGLCASEVKARTFASPPSDDLTFSRRAPERASSLGMFDVRNQLGSSQSHNSVSALRNNQELVSSCKSSCRLFGFSLTENTHVATKEVDASTITLPINAGPSFTRIVEDEFHPSRTLQSKAVGSNCTKGVLQY 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01734 706 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 53 222 IPR044835 GO:0003677|GO:0006355|GO:0009725
Vian6g01734 706 Gene3D - 298 371 - -
Vian6g01734 706 MobiDBLite consensus disorder prediction 1 52 - -
Vian6g01734 706 MobiDBLite consensus disorder prediction 12 39 - -
Vian6g01734 706 CDD B3_DNA 169 222 IPR003340 GO:0003677
Vian6g01734 706 Pfam Auxin response factor 261 341 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Vian6g01734 706 SUPERFAMILY DNA-binding pseudobarrel domain 164 222 IPR015300 -
Vian6g01734 706 Gene3D - 169 225 IPR015300 -
Vian6g01734 706 Coils Coil 138 158 - -
Vian6g01734 706 FunFam Auxin response factor 297 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01734 Vian-Chr6 34795577 34800532 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01734 170 491 B3 DNA Binding Superfamily AT2G33860 49.722 2.75e-109 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01734 K14486 - gmx:100789906 1115.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g01734 6 34795577 34800532 Vian6g01734 6 34795577 34800532 ECH