Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01730 ATGAAGAAAATTTCCAAGAGCAGCTGCAAGTCCGCATCACACAGGCTCTTTAAAGACAAGGCAAGGAACCATGTTGATGATCTACAGGTCATGTTCTTGGATCTGCAGTTTGCCAGAAAGGAGAGCCGAACGATTGATGTGGCACTCCTTGAGGAGCAACTCCATCAAATGCTTCGTGAGTGGAAGGCCGAGCTCAATGAGCCTTCTCCAGCTTCTTCTCTGCAACAAGGTGGTAGTCTTGGTTCATTCTCGACCGATGTCTATAGGCTATTGCAGCTCTGTGAGGAGGAAGATGATGCCACTAGTCCATTAGTTGCACCTAAGCCTGAACCTAATGATCAGACTATGCAGCCTGGAGCTAGGGTGATAGTTCAAGAGGGCCAGCATGAACAAGAATTTCTATTACTTAAAGAATGCAAACACTCCGCAGTAGGAGTTCCCAACATGGAAGCTAACAACTTGGACGGACCTGCTTTAGAACTTCATCAATTTGAATTCAATAAGGACTTGGATCACAGCTTTTATGCCGGTACAGGATTTTGTGAGGAAGGTGGTGTTCCTCATATATCTAGCTATCTTCCAAGTGCGTGTCCTCCTCCTTCTGCTTTCTTAGGTCCAAAATGCGCACTTTGGGACTGTCCAAGACCTGTTCAAGGGTTGGACTGGTGTCAAGATTATTGCAGTAGCTTTCATGCTGCTCTTGCTTTAAATGAAGGACCACCAGGCATGACCCCAGTTCTAAGACCTGGGGGAATTGGACTCAAGGATAATTTACTTTTCGCAGCTCTTAGTGCAAAGGCACACGGAAAAGTTGTTGGCATCCCAGAATGTGAGGGAGCAGCAACTGCAAAATCTCCATGGAATGCACCTGAACTCTTTGATATTTGTGTCCTGGAGGGTGAGACTATTAGGGAGTGGCTTTTCTTTGATAAGCCTAGAAGGGCTTTTGAGAGTGGGAACAGAAAGCAGAGGTCCCTGCCGGATTACAGCGGGCGTGGATGGCATGAATCTAGAAAACAAGTGATGAATGAGTTTGGAGGGCTGAAGAGATCCTATTACATGGACCCTCAGCCTCTGAACCTTTTTGAGTGGCACCTTTACGAGTATGAAATTAGCATGTGTGATGCATGTGCCTTATATCGGTTAGAACTTAAGCTTGTTGATGGGAAAAAGAGCTCAAAGGCAAAGATAATAACAGGTGATTCGGTTGCTGATCTGCAGAAGCACATGGGAAGCCTCTCTGCTGAGTTTCACTCCGATAGTAACAAACGGTCTGCCAAAGGTAGTAGAACCAAGCTTGGCATAGGAGGTGGTGTTTATTCAGCTTCTAACAGAGCTGCTCTACTAAATGCACCTTATCAATACGGCTTAACTGCACCATATGACTTTGTTGTTGACAACACAAGTGACTATATGTGA 1419 0.4553 MKKISKSSCKSASHRLFKDKARNHVDDLQVMFLDLQFARKESRTIDVALLEEQLHQMLREWKAELNEPSPASSLQQGGSLGSFSTDVYRLLQLCEEEDDATSPLVAPKPEPNDQTMQPGARVIVQEGQHEQEFLLLKECKHSAVGVPNMEANNLDGPALELHQFEFNKDLDHSFYAGTGFCEEGGVPHISSYLPSACPPPSAFLGPKCALWDCPRPVQGLDWCQDYCSSFHAALALNEGPPGMTPVLRPGGIGLKDNLLFAALSAKAHGKVVGIPECEGAATAKSPWNAPELFDICVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNLFEWHLYEYEISMCDACALYRLELKLVDGKKSSKAKIITGDSVADLQKHMGSLSAEFHSDSNKRSAKGSRTKLGIGGGVYSASNRAALLNAPYQYGLTAPYDFVVDNTSDYM 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01730 472 PANTHER TRANSCRIPTION FACTOR VOZ1 1 469 IPR039277 GO:0006355|GO:0048578
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01730 Vian-Chr6 34760742 34763042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01730 3 471 VOZ-9 Transcription Factor Family AT1G28520 65.849 0.0 629
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Vian6g01730 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01730 - - gmx:100784593 847.425