Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01717 ATGGGAACTTGTGATACACACTTTTTTCTGTCTCTTATGCAGATTTTCATTCCATGCTTGCTATGTATCATGGCCAAAGTTGAAGCTTTAAACGTAACAATCTCAGGCTTTTATGTGTTTGGAGACTCCACGGTAGACCCTGGAAACAATAACTACATCAAAACACCTTTCAAGAGCAATTTTCCACCTTATGGATTGGATTTTTCCAACCAGGTTCCAACAGGGAGATTTACCAATGGGAAGCTTGCCACCGATTACATCGTTTCATACACAGGTCTGAAGAAAGAGCTTCTTCCACCTTATCTGGATCCAAGCCTCACCAATGTGGAAGAGCTAATGACAGGAGTCAGTTTTGCCTCTGCCGGTTCTGGCTTTGACCCACTTACACCAACCATCACTAATGTAATTCCAATAGAAAAGCAGTTGGAATATTTCAGAGAATGCAAAAAGAGGATGGAGGATGCGATGGGGAAGCAAAGAATTGAAGATCATGTGAAGAAGGCTGCGTACTTCATCAGTGCTGTTGATGAGAGTGGACTGAATTTGTTGGCAGAAGGTGGTAGAAAGATTGTAGTAGCTGGAATACCTCCAATGGGATGTCTACCGTTGATGATCACCATGAATTCTCCCGATGCCTTGTTCCAACGTGATTGCATCGAGAAATACTCTTCTATTGCAAGAGATTACAATCTGCTCCTTCAACAAGAATTACGCAAAATGCAATTGCACCTTATAAATTCCTCTGCTTCAAATGCTAAGATCTATTATGTTGACATATATAAACCCATTGCGGATATGATCCAATCTCGTAAGAGATTTGGATTTGAAGAGGTTGACAGTGGGTGCTGTGGAAGTGGGTTGATTGAAGCATCGATATTGTGTAATAAGATTTCAGATGTGTGTGTTGATCCATCAAAGTACGTATTCTGGGATTCAATTCACCCAACTCAGAAGGCATATCACAACATCTTCTTGAGCAGCATCTCTACCATTGACTTCATCATCAATAACTAG 1014 0.4093 MGTCDTHFFLSLMQIFIPCLLCIMAKVEALNVTISGFYVFGDSTVDPGNNNYIKTPFKSNFPPYGLDFSNQVPTGRFTNGKLATDYIVSYTGLKKELLPPYLDPSLTNVEELMTGVSFASAGSGFDPLTPTITNVIPIEKQLEYFRECKKRMEDAMGKQRIEDHVKKAAYFISAVDESGLNLLAEGGRKIVVAGIPPMGCLPLMITMNSPDALFQRDCIEKYSSIARDYNLLLQQELRKMQLHLINSSASNAKIYYVDIYKPIADMIQSRKRFGFEEVDSGCCGSGLIEASILCNKISDVCVDPSKYVFWDSIHPTQKAYHNIFLSSISTIDFIINN 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01717 337 CDD SGNH_plant_lipase_like 37 324 IPR035669 -
Vian6g01717 337 Gene3D SGNH hydrolase 162 332 IPR036514 -
Vian6g01717 337 PANTHER GDSL ESTERASE/LIPASE EXL3 24 174 - -
Vian6g01717 337 Pfam GDSL-like Lipase/Acylhydrolase 38 163 IPR001087 GO:0016788
Vian6g01717 337 Pfam GDSL-like Lipase/Acylhydrolase 169 324 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01717 Vian-Chr6 34661621 34666524 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01717 8 323 Pollen Coat Proteome AT1G75930 31.700 4.97e-44 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01717 - - gmx:100788326 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g01717 6 34661621 34666524 Vian6g01717 6 34661621 34666524 ECH