Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01716 ATGGAGTACTTAGTAGTGAAAATCATGATACTGGCCACAATTCCATTGTATTCACTTGCTGCGGAAATTCCTCTAGTGAGGCAAGTGGCTTCAAAGTATAATGTGTCTTGTATACTGGTTTTTGGAGATTCAAGTGTTGATTCTGGCAACAACAATGCCCTTCACACCACAATGAAAAGCAACTTTCTTCCCTATGGCAAGGACTTCTTTGACAGTCGCCCAACAGGACGGTTTAGCAATGGAAGACTTGCAACAGACTTTGTTGCTGAAGCAGTGGGGTATAGAAAGGTGATTCCACCGTTTCTGGACCCTAATTTGAAGGCGGAAGATCTTGAGTATGGTGTTAGTTTTGCATCAGCAGCCACAGGTTTTGATGATTACACAGCAGAAGTTTCGAATGTTTTGTCTGTTTCAAAACAATTGGAGTATTTTGCGCATTACAAGATCCACTTGAGAAGAGAGGTGGGCGAAGAAAGAGCAGAATTCATTACAAGAAATGCCTTGTATATTATCAGTATGGGTACAAATGATTTCCTCCAGAATTATTTCTTGGAACCTACACGCCCTAAGCAATTCAGCTTGGAAGAATTTGAGAACTTCTTGCTCTCTCGCTTCGCCAAGGACGTTAAGGAAATGCATAGACTTGGGGCAAGGAGGTTAATCATTGTAGGAGTCCTCCCTCTGGGATGCATTCCACTTATCAAGACACTTAGAAGTGCGGAAGGCTGTGATAAAAGTTTAAATAGTGTTGCTCATGCATTCAATGCAAAATTATTACAGCAATTAAACATCCTGAAGACAAAGCTGGGCTTAAGAACTGCTTTGGTTGATGTTTATGACATGATCCAACGTGCAGTCACCAATCCTAAAAAATATGGATTTGTCGAAGGTTCGAAAGGATGTGTTGGAACAGGGACAATAGAATATGGAGATTCATGCAAAGGGGTGAATAGTTGTTCGGATGCAGACAAATATGTATTCTGGGATGCTGTTCATCCAACGCAGAAAATGTACAAGTTAATAGCTGAAGAGGCCATTGCATCTTTTGTTACTAATTTCTTTTAA 1065 0.4056 MEYLVVKIMILATIPLYSLAAEIPLVRQVASKYNVSCILVFGDSSVDSGNNNALHTTMKSNFLPYGKDFFDSRPTGRFSNGRLATDFVAEAVGYRKVIPPFLDPNLKAEDLEYGVSFASAATGFDDYTAEVSNVLSVSKQLEYFAHYKIHLRREVGEERAEFITRNALYIISMGTNDFLQNYFLEPTRPKQFSLEEFENFLLSRFAKDVKEMHRLGARRLIIVGVLPLGCIPLIKTLRSAEGCDKSLNSVAHAFNAKLLQQLNILKTKLGLRTALVDVYDMIQRAVTNPKKYGFVEGSKGCVGTGTIEYGDSCKGVNSCSDADKYVFWDAVHPTQKMYKLIAEEAIASFVTNFF 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01716 354 CDD SGNH_plant_lipase_like 37 346 IPR035669 -
Vian6g01716 354 Gene3D SGNH hydrolase 25 351 IPR036514 -
Vian6g01716 354 SUPERFAMILY SGNH hydrolase 167 347 - -
Vian6g01716 354 PANTHER GDSL ESTERASE/LIPASE EXL3 19 344 - -
Vian6g01716 354 Pfam GDSL-like Lipase/Acylhydrolase 38 344 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01716 Vian-Chr6 34654757 34658273 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01716 19 346 Pollen Coat Proteome AT1G75910 33.819 2.46e-60 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01716 - - gmx:100819691 612.453