Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01710 ATGGGTTCAGGCTATTGGTTTAAGACAATAATTAGCTTAAGAAAATCAAAACAAGGCAGATCAAAGAAAGCAAAGGGTATCTTAGCTCAAGAGAAACTAAATGCATCAAAGTCAAACAATTATACCGGGAAAGAGTCTAGTGATTTAGCAAATGGTATTAAAAGTGAAAACCTTGTCTCAGCTGGGGTGTCAGTTGAAACTATTGCTGCAACAAGGATCCAGACTGCATTCCGAGCTTATAAGGCTAGAAAGGCTTTACGGCGCGTGAAAGGATTTTCAAAACTGAAGATCTTAACAGAGGGTTTCTCTGTTAAAAAGCAAGCCAGTACAGCTATAACATACCTTCACTCATGGAGCAAGATTCAAGCCGAGATCAGAGATCGTCGAATATGTATGGTAACAGAAGACAGGATCAGGAGGAAGAAACTAGAGTCTCAACTAAAACTGGAAGCAAAGCTTCATGATCTGGAGGTTGAATGGTCTGGTGGTCCTGCAACCATGGAGGAAATCCTTGGAAAGATACATCAGAGGGAAGAAGCAGCAGTTAAGCGCGAAAGAGCCATGGCATATGCCTTTTCCCATCAGTGGAGGGCCAACTCTAGTCAGAGCCAACTGCTAGGTAGTTGTGAACTTAGCAAGGCTAATTGGGGTTGGAGCTGGAAGGAACGGTGGGTTGCTGCTCGGCCTTGGGAAAGCCGCATCTCCGGCTTATCTGTCACCCCAGAGAAAACTCAACATAAGCAGCCAAGTAAGGTTCAGAAGGATAAGAACACACCACCAAAAACTCCTGTATCAGTTAAACCTTCTTTAGCCATTGCAAAAGGGACTCCTCCTTCTGCCAATGCAAAAGGCAATTCAAAAGCTAGGAGATTGTCTTATCCACCGACTGCCGAGAAAACTGTGGTTCAAGGAGTGCAATGA 921 0.4397 MGSGYWFKTIISLRKSKQGRSKKAKGILAQEKLNASKSNNYTGKESSDLANGIKSENLVSAGVSVETIAATRIQTAFRAYKARKALRRVKGFSKLKILTEGFSVKKQASTAITYLHSWSKIQAEIRDRRICMVTEDRIRRKKLESQLKLEAKLHDLEVEWSGGPATMEEILGKIHQREEAAVKRERAMAYAFSHQWRANSSQSQLLGSCELSKANWGWSWKERWVAARPWESRISGLSVTPEKTQHKQPSKVQKDKNTPPKTPVSVKPSLAIAKGTPPSANAKGNSKARRLSYPPTAEKTVVQGVQ 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01710 306 PANTHER IQ-DOMAIN 5-RELATED 1 283 - -
Vian6g01710 306 MobiDBLite consensus disorder prediction 236 306 - -
Vian6g01710 306 ProSiteProfiles IQ motif profile. 66 94 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01710 Vian-Chr6 34593735 34596755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01710 1 294 IQD Protein Family AT2G33990 51.361 2.86e-88 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01710 - - var:108341135 606.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g01710 6 34593735 34596755 Vian6g01710 6 34593735 34596755 ECH