Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01707 ATGGAAAGGATCAAAACCTTAGAGCGCATTGTCGTAATCCCTTCTCACCCTCCCTTCCTTCAGGACCACTCACTCCCTCTCTCCCACCTCGACACCGACCCCAACCTTCACCTCACCTTTCGTTACCTCCGCGCGTACACTTCAACCGCTCCACCTACCTCCCTCGACCCCTTCAACGTCATCTCCTCCTCCCTCTCCAACGCCCTCACCCAATTCTACCCCCTCGCCGCCACACTACGCCGCCGCCCAACCTCCCCCCACCGTCTCGAACTCTGGTGTGCCGCTGCCCAGGGCATCCCCCTCGTCCGCGCCGCCGCCGATTTCACTCTCCACTCCGTCAACCACCTGGACGACCCGGCCTCGCCTCTCGTGGAGCAGTTGGTGCCCGACCCGGGTCCGGAGGAGGGGCTGGAGCACCCCTGCATACTCCAGGTGACGGTCTTCGCGTGCGGCGGGTTCGTCCTTGGCGCCGCCATGCACCATGCGCTATGCGACGGCATGGGGGGCACGCTGTTCTTCAACGCGGTGGCGGAGCTGGCGCGCGGGGCCACGCGGATGACGGTGGAGACGGTGTGGGAGCGTGATAGGCTATTGGGTCCCAGAAAGCCGCCAAGAGTGGATTCACCGTTGATCGATGAGTTTCTGCGTTTGGAAAAAGGAGTTCTGCCGTACGAGGAGGGCGTTGGCGGGGTTGCGAGAGAGTGCTTTCACGTGAAGGATGAGTGCTTGCACATGTTGAAGAGATCCTTGTTGGAGCAATCCGGGTTCAACTTCACCGTTTTTGAGGCTCTCGGTGCCTACATTTGGAGAGCCAAGGTGTTGGCCTCTGGAATTCAGGGGGAGGAGAAGGTGAAGTTTGCATACTCAATCAACATACGGAGATTGGTAAAGCCAGTACTCCCTGGTGGGTATTGGGGCAATGGTTGTGTGCCAATGTACGTAGTGTTGAGTGCGAAGGAGTTGATAGAGAGACCCATCTGGGAAACTGCGGAGCTAATAAGAAAGAGTAAAAGCAATGTGAGCGATGAGTATGTGCGGTCTTACATAGATTATCAGGAGCTGCATTTTGGTGATGGGATCACAGCAGGAAGAGAGGTGAGTGGGTTCACTGATTGGAGGCATTTGGGCCACTCAACTGTGGACTTTGGGTGGGGAGGCCCAGTTACTGTCTTGCCCCTTGGAAGGAACCTGCTTGGGAGTGTTGAGCCTTGCTTCTTTTTGCCTTATTCAACTGCCTCTTCTCAGAATATAGAGGGCTTCAAAGTTTTGGTCACTTTGAGACACTCTGCATTACCAGCTTTCAGACAAGCCATGCAAGTCTTTTCCACTACCCAAGACCACTGGCCCATTCACATATAG 1359 0.5622 MERIKTLERIVVIPSHPPFLQDHSLPLSHLDTDPNLHLTFRYLRAYTSTAPPTSLDPFNVISSSLSNALTQFYPLAATLRRRPTSPHRLELWCAAAQGIPLVRAAADFTLHSVNHLDDPASPLVEQLVPDPGPEEGLEHPCILQVTVFACGGFVLGAAMHHALCDGMGGTLFFNAVAELARGATRMTVETVWERDRLLGPRKPPRVDSPLIDEFLRLEKGVLPYEEGVGGVARECFHVKDECLHMLKRSLLEQSGFNFTVFEALGAYIWRAKVLASGIQGEEKVKFAYSINIRRLVKPVLPGGYWGNGCVPMYVVLSAKELIERPIWETAELIRKSKSNVSDEYVRSYIDYQELHFGDGITAGREVSGFTDWRHLGHSTVDFGWGGPVTVLPLGRNLLGSVEPCFFLPYSTASSQNIEGFKVLVTLRHSALPAFRQAMQVFSTTQDHWPIHI 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01707 452 Gene3D - 2 212 IPR023213 -
Vian6g01707 452 Pfam Transferase family 4 438 - -
Vian6g01707 452 PANTHER ACYL TRANSFERASE 4 5 441 - -
Vian6g01707 452 Gene3D - 229 439 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01707 Vian-Chr6 34573473 34575167 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01707 34 394 Monolignol Biosynthesis Gene Families AT5G48930 28.342 1.04e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01707 - - vra:106774544 902.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g01707 6 34573473 34575167 Vian6g01707 6 34573473 34575167 ECH