Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01690 ATGTCAACTCCTTCATCATCTTCTTCTATTTGGGTGTTGTCAAACATAAAGCTTCAGTTCTTTGCCCGCATCAGACGGTTTCTCCAATCCAAAGCAACCAGAAAGCGTTTTGATCCCTCCGATCGGTTTGACGTGGCTAAGGGCAGTGGTGAACACAAGAAGGCTGAAAATATTGAAACAGTACAGGTTATGCAGAAGACTGAAGAGGAGGAGGAGGAAGTTTCTGCGATCATGTTCCAGAGAACTGTCAAGATGCTTCACTTTGGAAGCTGGGCAGAGAAGGAAGTGGCGGCAAAAGAGATTGAAAAGTTAGCCAAGGAAGATGTTAAGGTCAGAAAGTTGATTACAGAACTTGGGGTGGTGCCGGTGTTGGTATCTATGGCGGCGTCGCCAGTGGCTAGCCGCAGGCGAGCCGGGTTGACGGCGTTGGTCCACCTGGCTGATGGAACTTACACTGGAGTTATTGTGAACCGCTCATTTGGACTTTTGGGTGATGAAGACAAGATTGATGTACACAAAGTGGCAATTGGCCTTGGCAGGAACAAGGCTTTGATAGTTGAGGCAGGAATATTGTCCAAGCTGCCAAATACAATTGACCTTGTAGATGAATCAACAACATGTAAATTGGCAGAGTTGCTTTTGTCACTGTCATCACTAGTAAACACTCAGTTCCCTCTTGCTTCATTAGACTTTATCCCATTACTTAGGCACATTTTTGAGACAGACACATGTTTTGACACGAAACAATCGTGTTTGAGTGCTTTGTATAACCTATCAACTGTATTAGAAAATGCATCCGCTATGGTTTCAAGTGGGTTGGTCCCTATCCTCTTGGAAGCGTCATCGTTAAAAGAAATTTCAGAGAAAGCACTTGCCACTCTAGGGAACTTGTCAGTGACTTTGATGGGGAAGAAAGCAATAGAGAACAGCACAATGGTCCCAGAAACCTTCATTGATATTTTGTCATGGGAAGATAAGCCTAAATGCCAAGAGTTATCGGTATATATTTTAATGATTCTAGCACATCAAAGTTCGTTGCAAAGAAAGAAGATGGCACAGGCAGGGATTGTTCCTGTGCTTCTTGAAGTGGTTTTATTGGGCAGCCCTTTGGCTCAAAAGAGAGCAATGAAACTATTGCAATGGTTTAAGGATGAAAGGCAGACTAAGATGGGGCCACATTCTGGTCCACAAACACCAAGATTTGCAATGGGATCACCTTTAAATCAAAGAGAAGCAAAAGAAGGGAAGAAAATGATGAAGAGTTTGGTGAAACAGAGTCTGCACAGGAATATGCAAATAATAACTCACAGGGCAAATGCTGCAGGGGAGTCGTCTAAATTGAAGTCTTTGATCATCAGCACAAGTTCCAAGAGTTTGCCTTACTAA 1386 0.4329 MSTPSSSSSIWVLSNIKLQFFARIRRFLQSKATRKRFDPSDRFDVAKGSGEHKKAENIETVQVMQKTEEEEEEVSAIMFQRTVKMLHFGSWAEKEVAAKEIEKLAKEDVKVRKLITELGVVPVLVSMAASPVASRRRAGLTALVHLADGTYTGVIVNRSFGLLGDEDKIDVHKVAIGLGRNKALIVEAGILSKLPNTIDLVDESTTCKLAELLLSLSSLVNTQFPLASLDFIPLLRHIFETDTCFDTKQSCLSALYNLSTVLENASAMVSSGLVPILLEASSLKEISEKALATLGNLSVTLMGKKAIENSTMVPETFIDILSWEDKPKCQELSVYILMILAHQSSLQRKKMAQAGIVPVLLEVVLLGSPLAQKRAMKLLQWFKDERQTKMGPHSGPQTPRFAMGSPLNQREAKEGKKMMKSLVKQSLHRNMQIITHRANAAGESSKLKSLIISTSSKSLPY 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01690 461 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 10 152 - -
Vian6g01690 461 Gene3D - 53 424 IPR011989 -
Vian6g01690 461 MobiDBLite consensus disorder prediction 388 414 - -
Vian6g01690 461 SUPERFAMILY ARM repeat 83 382 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01690 Vian-Chr6 34424232 34426747 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01690 151 408 U-box Gene Family AT1G67530 27.341 1.45e-17 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01690 - - gmx:100819002 652.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g01690 6 34424232 34426747 Vian6g01690 6 34424232 34426747 ECH