Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01683 ATGCCCGACTTCAACGACTCCATCGCGCCGCCGTCGCGCCCCGTCCCTGTTCGCGAGGACTGCTGGTCCGAGGAGGCCTCTTCCACGCTTGTTGACGCCTGGGGCCGACGCTACCTCGAGCTCAACCGCGGCAACCTCCGCCAGAAGGATTGGCAGGATGTCGCCGATGCTGTCAACGCGCTCCACGGACACACCAAGAAGACGCACCGCACAGACGTCCAGTGCAAGAACCGCATCGATACCATAAAGAAGAAGTACAAGATCGAGAAGGCTAGGGTTTCGTCCTCCAATGGTACTCTCTCTTCCTCCTGGCCTTTCTACGAACGATTGGATGCTCTGATTGGCCCTAATTTCAACGCCAAGAAACCTCCTTCCTCCTCGCCGTCTCCTTCGCCGCCTGTGGCTCTTCCGCTGCTTCCGCATCGGAAGAACCCTTCCTCCTCACCTGCGATTGCGGTGACACCGACGGCCGTCGCGCTGCCTCAGAAGCGTTCCGCCGCTGCGGCGGCGATGGACGAGGGTTATTTCAGAAGAAATTACTCCGCTGTTGCCGCGGCTGCGGCGGCTGCGGAGGCTGACGAAGACGAAGAGGAAGAGGAAGAGGAGGAGGCGGACGATGTGGAGGAGGAGGAGGACGAAGATGAAGGGAGGGGGAGCGAGGTGGAGGAAGGGGAGAAGGAGAGGGAAGGGATGAGGAGATTGGCGAAGGCGATAGAGAGGTTTGGTGAAGTGTATGAGAGAGTGGAGGGTCAGAAGCTGAGGCAGATGGTGGATTTGGAGAAACAGAGGATGCAGTTTGCTAAAGATCTTGAAGTCCAGAGGATGCAGATGTTTATGGACACACAGGTTCAGCTCGAGAGAATTAAGCGGGGGAAACGATCTGGCTCTAACGATGTGTTTAGTGCTGAACCATGTGTGGTAGGTAATGGTGAAGTCTGGCAGGAAGCGGCATCTATTATCTGCTCTGTTCAAATCTTCAACAAAGGTGCAACTACAAGCACTGTAACATGTCCCAGATCCTCAGTAAGGTCCTATGCTGAGAACATTAAGTGTGTAGATGAAAATTTGATGCTGGCTCTGGCTTGCTGGTGGCTTTGA 1098 0.5556 MPDFNDSIAPPSRPVPVREDCWSEEASSTLVDAWGRRYLELNRGNLRQKDWQDVADAVNALHGHTKKTHRTDVQCKNRIDTIKKKYKIEKARVSSSNGTLSSSWPFYERLDALIGPNFNAKKPPSSSPSPSPPVALPLLPHRKNPSSSPAIAVTPTAVALPQKRSAAAAAMDEGYFRRNYSAVAAAAAAAEADEDEEEEEEEEADDVEEEEDEDEGRGSEVEEGEKEREGMRRLAKAIERFGEVYERVEGQKLRQMVDLEKQRMQFAKDLEVQRMQMFMDTQVQLERIKRGKRSGSNDVFSAEPCVVGNGEVWQEAASIICSVQIFNKGATTSTVTCPRSSVRSYAENIKCVDENLMLALACWWL 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01683 365 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 11 292 IPR044823 -
Vian6g01683 365 MobiDBLite consensus disorder prediction 187 231 - -
Vian6g01683 365 MobiDBLite consensus disorder prediction 190 220 - -
Vian6g01683 365 Coils Coil 183 217 - -
Vian6g01683 365 MobiDBLite consensus disorder prediction 118 150 - -
Vian6g01683 365 Gene3D - 22 88 - -
Vian6g01683 365 Pfam Myb/SANT-like DNA-binding domain 19 113 IPR044822 -
Vian6g01683 365 FunFam trihelix transcription factor ASIL2 22 88 - -
Vian6g01683 365 MobiDBLite consensus disorder prediction 123 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01683 Vian-Chr6 34336171 34339620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01683 18 155 Trihelix Transcription Factor Family AT3G14180 48.276 3.45e-34 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vian6g01683 Myb_DNA-bind_4 8.2e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01683 - - gmx:100815241 456.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g01683 6 34336171 34339620 Vian6g01683 6 34336171 34339620 ECH