Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01674 ATGGTTTTAATTTATAACTCTGTATGTTTTTTATGGATGACATGCAGTGTGTGGCAACGTAACTTCAGCCAATGTTACAAATCAGATTCATTGATTATTCTAACCAAAGCAAAACTTAAGAAATTCGCCAATGCCTTTGCTTGGCCACTATTCAAACTAGGGAAGAGTGGCTCTCATGGCAATGAAAAAGATTATTGTGACATTCTGCCCAGTTCTGATGTGCCAAAGATAGCCCAAAATGTACCAGAAATTGTTAGTTCTACACGTCGTAAGTTACTTCAGTCTAGTGGTAATAACCTTGCAGCTGTACCTTTCGATGACAAAACACCAATAGAGTTTAGCACTGCTCCAACTACCTTCAGTACTGGAGCTATTCCTGCTGTTCCAGATGCCACTGAGAAACAAAATCAGCCTGCACCCTCAGATCCTAATGCTCCTGACGATGCTTCTGATGAAAATCAATCACAAGATGCTTCCGATGGAAATCAAGAAAGTCAACATGTAAATAATGGTGCTTCTATCTGGAAGTGGATAATTATTATTCTTCTTCTGCTGGCCATTATTATCATAATTCTTTTATACATTATGCGAAAACGAGCCGCAAAAGTAATAGGCCCCTGGAAGACAGGAATAAGTGGACAGTTGCGGAAAGCGTTTATAACAGGGGTGCCCAAGTTGAATAGAGCAGAATTAGAGACAGCCTGTGAAGATTTTAGCAATATTGTTATTGATTCTTATGCCGAGTGCACCATCTACAAAGGAACATTGTCTAGTGGAGTTGAGATTGCTGTAGTTTCTACTCTAATTACTTCTTCTAAGAATTGGTCAAAGAGCATGGAGATAAGATACCGCAAAAAGATTGATAATTTGTCTCGCATAAATCATAAGAACTTTATTAATCTTATTGGCTACTGCGAAGAAGAAGAACCATTCACTAGGATGTTGGTGTTTGAGTATGCTCCAAATGGAAACTTATTTGAGCATTTACATGTTTCGCATTTGGAACGTATTGATTGGAGTGCAAGGGTAAAGATTATCATGGGGGTTGCGTATTGCCTCCAATACATGCACCATGACTTAAATCCGCCTATGGCACAGAGCAAGCTAGCTTCAAATATGATATTTTTAACAGATGATTTTTCTGCTAAGATTGCAGAGGTTACTTTTAGACATATTGTGTCACCAGAGAGCTTGGGTGATTCAAATAAATCTGATGATGGGCCATCCGACAAGAATATTGAAACCAATGTTTACAAATTTGGAGAGTTATTGCTGGAAATCATCTCAGGGAAATTACCTTACTCGGAAGAACATGGCAACCTAGTGGACTGGGCTGCTAAGTACATAAACGAGAAAACAAACCTCAAAGATTTGGTGGATCCCAGCCTCGAATGTTTCAAGGAGAACGAACTTCATTGCATTTGTGATGTGATCCAAGACTGTATCAAACCTGATGTAAAGTCAAGACCAACAATGAGGGACGTGACTTCCAAATTAAGGGAAGTGCTTGGTTTGTCACCTGAGCAAGTGGTCCCAAGACTTTCTCCACTCTGGTGGGCTGAATTGGAGATCCTGTCAGTGGAGACGACTTAA 1593 0.3967 MVLIYNSVCFLWMTCSVWQRNFSQCYKSDSLIILTKAKLKKFANAFAWPLFKLGKSGSHGNEKDYCDILPSSDVPKIAQNVPEIVSSTRRKLLQSSGNNLAAVPFDDKTPIEFSTAPTTFSTGAIPAVPDATEKQNQPAPSDPNAPDDASDENQSQDASDGNQESQHVNNGASIWKWIIIILLLLAIIIIILLYIMRKRAAKVIGPWKTGISGQLRKAFITGVPKLNRAELETACEDFSNIVIDSYAECTIYKGTLSSGVEIAVVSTLITSSKNWSKSMEIRYRKKIDNLSRINHKNFINLIGYCEEEEPFTRMLVFEYAPNGNLFEHLHVSHLERIDWSARVKIIMGVAYCLQYMHHDLNPPMAQSKLASNMIFLTDDFSAKIAEVTFRHIVSPESLGDSNKSDDGPSDKNIETNVYKFGELLLEIISGKLPYSEEHGNLVDWAAKYINEKTNLKDLVDPSLECFKENELHCICDVIQDCIKPDVKSRPTMRDVTSKLREVLGLSPEQVVPRLSPLWWAELEILSVETT 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01674 530 PANTHER PROTEIN MALE DISCOVERER 2 86 528 - -
Vian6g01674 530 SUPERFAMILY Protein kinase-like (PK-like) 248 499 IPR011009 -
Vian6g01674 530 FunFam Inactive receptor-like serine/threonine-protein kinase 210 319 - -
Vian6g01674 530 Pfam Protein tyrosine and serine/threonine kinase 250 499 IPR001245 GO:0004672|GO:0006468
Vian6g01674 530 MobiDBLite consensus disorder prediction 124 166 - -
Vian6g01674 530 MobiDBLite consensus disorder prediction 134 166 - -
Vian6g01674 530 Gene3D Transferase(Phosphotransferase) domain 1 320 509 - -
Vian6g01674 530 Gene3D Phosphorylase Kinase; domain 1 211 319 - -
Vian6g01674 530 ProSiteProfiles Protein kinase domain profile. 198 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01674 Vian-Chr6 34263431 34265814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01674 178 502 Receptor kinase-like Gene Family AT5G56040 26.496 2.14e-32 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Vian6g01674 PK_Tyr_Ser-Thr 9.8e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01674 - - vun:114189247 863.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g01674 6 34263431 34265814 Vian6g01674 6 34263431 34265814 ECH