Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01672 ATGGCTGTTTCAAGCACCGTATCACCAGCTATCCGTAGCTCAGGAATATACCCTTCAATACCCTGTAACAACCATCTTTGCGCTTGGGGCAATGACGCAGCTAATGAGGGCTCCCTCTGGGATAAAGCCCTATCTTCATCTCTTTGCACCAAGAGGAACACCCCTCACGCTGCCAAAGGTGATTCCTCCACACAGCCTCCTAAGCCTTCACGTTTTCCCTACACCAGTCTTGGTTTTTCCAAGTGTTCCACATTGACAAAATGGAGAGTGGGGACCGAATCAGGAGGAATGGAGAAAAAAATTGTGATGCAAAAGTACGAGATTGGACGCTTCCTTGGACAAGGCAATTTCGCCAAAGTTTACCATGCAAGGAACTTGAAGACAGGCCAGAGCGTGGCCGTGAAAGTTATCAACAAAGAGATGATGATGATGAAGGAGGGTATGAAGGATCAAATCAAGCGCGAAATCTCAGTGATGCGCCTTGTGAGGCACCCCAACATTGTGCAGCTGTACGAGGTCATGGCAACCAAGACAAAGATATATTTTGCAATGGAATTGGTGAAAGGTGGCGAACTTTTTCATAAAGTGTCCCGAGGAAGGTTGAAGGAGGATGTAGCAAGAAAATATTTTCAGCAGCTGATTGATGCTGTTGATTACTGCCACAGCTTAGGGAAGGATGGCCTACTTCACACAATATGTGGAACTCCAGCCTATGTTGCTCCTGAGGTTATAAAGAATAAAGGATATGATGGAGCCAAGACAGATATATGGTCTTGTGGAGTGATTCTCTATGTTCTTTTGGCAGGTTTTGCTCCTTTCAACGACAGGAATTTGATGGAGATGTATAAGAAGATTATCAAAGCAGATTGCCAATTCCCAAAATGGTTCTCTATAGATGTGAAAAGACTTATTTATAGGATCCTTGATCCCAATCCAACGAGTAGAATTAGTGTTGCTAAGATTGTTGTATTTGATTCATCAGATTCAGATGGCAGTCCAATGTCAACCAAAAAAGAAAGCCCCTTGAAGCTATATCAGTTCAATGCATTTGATTTGATATCACTTTCATCAGGTCTTGATCTTTCTGGTTTGTTTGAAAATGATCATAATGAAAGACAGCTAACGAGATTTACTACCAGAGAAAGACCTTCTACTGTTGTATCAATGCTTGAAGAGATAGCACAGATAGATGATAAATTTAAAGTCTTGAAGAAAGATGGGATTGTTAGATTGGAGGGATGCAAATCAGGAATAAAAGGCCAACTCATCCTACATGCAGAAATTTTTGAAGTTACATCTTCCTTGCATGTTGTTGAGGTGACAAAAGTAGCTGGAAACACATTGGAATATTCAAAATTCAGGGAACAGTACCTCAAACCTTCTTTCAAAGAAATTATTTAA 1401 0.4126 MAVSSTVSPAIRSSGIYPSIPCNNHLCAWGNDAANEGSLWDKALSSSLCTKRNTPHAAKGDSSTQPPKPSRFPYTSLGFSKCSTLTKWRVGTESGGMEKKIVMQKYEIGRFLGQGNFAKVYHARNLKTGQSVAVKVINKEMMMMKEGMKDQIKREISVMRLVRHPNIVQLYEVMATKTKIYFAMELVKGGELFHKVSRGRLKEDVARKYFQQLIDAVDYCHSLGKDGLLHTICGTPAYVAPEVIKNKGYDGAKTDIWSCGVILYVLLAGFAPFNDRNLMEMYKKIIKADCQFPKWFSIDVKRLIYRILDPNPTSRISVAKIVVFDSSDSDGSPMSTKKESPLKLYQFNAFDLISLSSGLDLSGLFENDHNERQLTRFTTRERPSTVVSMLEEIAQIDDKFKVLKKDGIVRLEGCKSGIKGQLILHAEIFEVTSSLHVVEVTKVAGNTLEYSKFREQYLKPSFKEII 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01672 466 ProSiteProfiles NAF domain profile. 342 366 IPR018451 GO:0007165
Vian6g01672 466 SUPERFAMILY Protein kinase-like (PK-like) 99 323 IPR011009 -
Vian6g01672 466 FunFam Non-specific serine/threonine protein kinase 97 186 - -
Vian6g01672 466 FunFam Non-specific serine/threonine protein kinase 343 466 - -
Vian6g01672 466 CDD CIPK_C 348 463 - -
Vian6g01672 466 MobiDBLite consensus disorder prediction 53 72 - -
Vian6g01672 466 Gene3D Kinase associated domain 1, KA1 347 466 - -
Vian6g01672 466 Pfam NAF domain 347 402 IPR004041 GO:0007165
Vian6g01672 466 ProSitePatterns Protein kinases ATP-binding region signature. 112 135 IPR017441 GO:0005524
Vian6g01672 466 Gene3D Transferase(Phosphotransferase) domain 1 97 224 - -
Vian6g01672 466 Gene3D Transferase(Phosphotransferase) domain 1 225 346 - -
Vian6g01672 466 ProSiteProfiles Protein kinase domain profile. 106 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian6g01672 466 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 97 452 - -
Vian6g01672 466 Pfam Protein kinase domain 106 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian6g01672 466 Pfam Protein kinase domain 229 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01672 Vian-Chr6 34241757 34244918 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01672 101 466 CBL-interacting serine-threonine protein kinases AT5G45820 53.477 7.72e-147 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Vian6g01672 Pkinase 6.5e-30 CL0016