Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01657 ATGAAGAGTCGTTGTGATGAATGGAAGCCTTTTATAGTAATGATAGCAATTGATTTTTCTTTTGCTGTAGTGAATATTCTTCTCAAGAAAGTCCTTGAAGAGGGGGTGAACCATTTGGTTTTTATCACATACCGGTTGACAATTGCTACCATTTTCATAGCCCCTGTCGCCTACTTTAAAGAAAGAAACGACAGACCAAGGCTCACATTTCGAATTCTATGTTACCTCTTCTGCAGTGCCATTGTTGGGGCATCAGTCACTCAATACTTTGTCCTTGTGGGGATACAATATACTTCTGCTACCTTCGCTTGTGCTTTCATCAACATGGTGCCAGTGGTCACATTCATGATGGCATTACCTTTTGGATTAGAGACTGTGAAAATCAAATGCAACAGTGGGAGAGCTAAGATTCTCGGTTCATTGGTGTGCATAGGTGGCGCATTGATGTTGACACTTTACAAAGGAAAGCCACTGGTTACTTTTTCTCACAATGAATCCGCAGCTTCTATGGTCAAGAGTTCTGCAGTGAATATATATTCTACAAAGACAACGGAGAAATGGACTATTGGTGTAATAGCCATGGTTATAGGAACCATCTTTTGGTCTTCTTGGTATATTTTACAGTCAAAAATAAGCAAGAGATATCCATGCCAGTATTCTAGCACAGCCATCATGAGCTTCTTTGGAGCCCTTCAATCAGCTGTTATTTGCTTGTGCACTGACCACAACTTGTCCATTTGGGTTCTCAAGGGAAAGATACAAATCATTGCTTTTCTATATTCTGGGATAATAGGATCAGGTTTGTGTTTTGTGGGAATGTCATGGTGTGTGAAGAAGAGGGGTCCTGTCTTTACTGCAGCATTCAGTCCTCTTTTTTCATTTACCTGGTTGCTTAGTGTGATGGGATCCATCTTGGTGATTATTGGATTATACATTCTTCTATGGGGTAAGACCATGGAGATGAAGAATCGTGTGACAAAGTTAGTCCAAGAAGCTGAAGAAACCAAGGAACAAGAGCCGCAGCCGCAAATACAACAGTTGACAGTGTATGTTCACACAGAATCGTGTGATTCGTAG 1077 0.4085 MKSRCDEWKPFIVMIAIDFSFAVVNILLKKVLEEGVNHLVFITYRLTIATIFIAPVAYFKERNDRPRLTFRILCYLFCSAIVGASVTQYFVLVGIQYTSATFACAFINMVPVVTFMMALPFGLETVKIKCNSGRAKILGSLVCIGGALMLTLYKGKPLVTFSHNESAASMVKSSAVNIYSTKTTEKWTIGVIAMVIGTIFWSSWYILQSKISKRYPCQYSSTAIMSFFGALQSAVICLCTDHNLSIWVLKGKIQIIAFLYSGIIGSGLCFVGMSWCVKKRGPVFTAAFSPLFSFTWLLSVMGSILVIIGLYILLWGKTMEMKNRVTKLVQEAEETKEQEPQPQIQQLTVYVHTESCDS 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01657 358 Coils Coil 318 338 - -
Vian6g01657 358 Pfam EamA-like transporter family 11 150 IPR000620 GO:0016020
Vian6g01657 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 154 - -
Vian6g01657 358 PANTHER WAT1-RELATED PROTEIN 9 330 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01657 Vian-Chr6 34125997 34128251 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01657 8 261 Nodulin-like Gene Family AT3G30340 50.000 2.82e-89 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01657 - - gmx:100803670 624.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03326 1 55382198 55387816 Vian6g01657 6 34125997 34128251 PCT