Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01643 ATGATGAAGTGGGGAGGAAGAAATCGTTCTTCAACTTCCTCTTCTGTCTCTTCCTTCATTTCTCATGCATCTCCTTTCTCTTGGTTCTCCAAGTTCAAGAATATGAGAATCATCAATTCGGAGCCAAGTGCTGCAAAAATGAAGCACAAGACAAAGCCTAGTAGTTCACCTCAATATTTCTGTGAGATTGGAGATAGAAGATGTTGTGTAAAGGATGATCGTGATTTCTGTAGACAACCTTTAAATGAAGAGAGTTATGAGGATAAGAAGAATAAAGATATTGATGAGAGTGTGATTCCCTCCTCAAGTTGCTTTGGTGGTAGAAGGGATGCTAAAGGCACACTCGAGTTAAAGGAGAGGGATATTGGTCAAGGAGAAGAAAGAAAGTTGGTGGATGATGGGAAGGTTTCAAAGAAGATGGATGTGTACAATAGAGAAAAGGAATATGAAAACTTAAGGAAGAGATTTGAGAGGAAAGCAAAAAAGGCTTTTCAAGACCAACTCTTGACACTTGAAAGAGAAGTTGAGGAACTTAAGTTTGGATCAAGTAAAGCAGTGGAAAAAGATGTGTTGCAAGTTGAATCACCTAGAACAATTTGCACCCCAAGAACACACGCTTTTTCTTCTTCTGCAATTTCAAGGAATCCCATCCTTGGAAATGTTATAGAAAATTTTGAGAAAAATGAAAGGCTGTCTCACAAGAAAATGAGTTCTGAGAGGCAGAACTTGAAACAAACTGAGGAGACGAAGGTAAAGACCAACAGGAATAAGCAATCACATCATCTCAACAGAGAACATCAGAGGAGGAAACAAAAGCCGAGCTCTAGGGTCAAAATACATTCTCCAAGGATGGTTTCTAAGGTTGAAATTTGCAAAATAAAGGCCCTGGAAGACATGAAGAAAGCCAAACTAAAGATGAAGAAAGAAAAGGAAGAGATTGTGGAGGAAGTACCAGTATTAGAAAGCTTTGCTGTGATTAAGTCTTCAATAGATCCAATGCAAGATTTCAGAGACTCAATGATTGAGATGATCATAGAGAATCGGATTATTCAGCCAGAAGAAATGGAAGATCTTTTGGTATGTTATCTGACTTTGAATGCAGATGAATATCATGATCTCATCATCAAAGTGTTCAGGAAGGTATGGTTTGACATGAGCCAAGGTATTTTGGGTATTAAACTAAACATGCAATGTGGTTACTATGAATAA 1209 0.3797 MMKWGGRNRSSTSSSVSSFISHASPFSWFSKFKNMRIINSEPSAAKMKHKTKPSSSPQYFCEIGDRRCCVKDDRDFCRQPLNEESYEDKKNKDIDESVIPSSSCFGGRRDAKGTLELKERDIGQGEERKLVDDGKVSKKMDVYNREKEYENLRKRFERKAKKAFQDQLLTLEREVEELKFGSSKAVEKDVLQVESPRTICTPRTHAFSSSAISRNPILGNVIENFEKNERLSHKKMSSERQNLKQTEETKVKTNRNKQSHHLNREHQRRKQKPSSRVKIHSPRMVSKVEICKIKALEDMKKAKLKMKKEKEEIVEEVPVLESFAVIKSSIDPMQDFRDSMIEMIIENRIIQPEEMEDLLVCYLTLNADEYHDLIIKVFRKVWFDMSQGILGIKLNMQCGYYE 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01643 402 MobiDBLite consensus disorder prediction 232 279 - -
Vian6g01643 402 NCBIfam uncharacterized plant-specific domain TIGR01568 323 385 IPR006458 -
Vian6g01643 402 Coils Coil 292 316 - -
Vian6g01643 402 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 191 386 IPR038933 GO:0045892
Vian6g01643 402 Coils Coil 236 256 - -
Vian6g01643 402 ProSiteProfiles OVATE domain profile. 325 384 IPR006458 -
Vian6g01643 402 MobiDBLite consensus disorder prediction 261 277 - -
Vian6g01643 402 Coils Coil 146 166 - -
Vian6g01643 402 Pfam Transcriptional repressor, ovate 329 385 IPR006458 -
Vian6g01643 402 MobiDBLite consensus disorder prediction 232 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01643 Vian-Chr6 33971448 33972656 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vian6g01643 Ovate 3.3e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01643 - - gmx:102666239 532.332