Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01622 ATGGTTGATCTTGCAATGAGGAAAAACAGTACTACTTCCCTTAGAGTATCAGCGATCATAGTGGACCAGAGAGGAAGAAGGCTGAAAGAGTTTGCAGCTTCTATAAACTTTCCATTTACGTTTGATCAAATGATGATGGAAAGAGAAGAAGATATTGAAGGAATTGAAGTTGGTGAAACAGTGATAGTGAACTGTATGATAGACCAATGGATGCCTAATAGGAGCTTCTCACTGGTGAAAACGTTTTTGGATGGTGTGACGAAACTGTGGTCGAGGCTTGTGGTTTCGGTGGAAGAAGAACTGTTTAATTTTTCAAGGCTGAAATCTATGTCCTTTGTGGAGTTCTTCTGTTTTATGCAACAAGCTTTTGCTGTTAAGCACAGCCCAAATTGCTCTACGGTGTGTCTTGTGGGATATTGCCTTTGCAACTGCGATTCTACAACAATGGATGTACAACACAACGTTAGCAAACCCTTCTAG 480 0.4062 MVDLAMRKNSTTSLRVSAIIVDQRGRRLKEFAASINFPFTFDQMMMEREEDIEGIEVGETVIVNCMIDQWMPNRSFSLVKTFLDGVTKLWSRLVVSVEEELFNFSRLKSMSFVEFFCFMQQAFAVKHSPNCSTVCLVGYCLCNCDSTTMDVQHNVSKPF 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01622 159 Pfam GRAS domain family 3 116 IPR005202 -
Vian6g01622 159 ProSiteProfiles GRAS family profile. 1 159 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01622 Vian-Chr6 33772431 33775805 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01622 4 116 GRAS Transcription Factor Family AT5G59450 31.250 3.74e-06 43.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vian6g01622 GRAS 2.7e-10 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01622 - - gmx:100804613 184.496