Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01601 ATGGTTGTGGAAGATTCACAAAAATCAACTATCACCGATGACCAAAACCCTAGCAGGGTCGACAACGACGACGACGATCTCGAAGATGGGGAGATCCTCGAAGATGCCGACGACGCCGCCTCGGCTGCCTCCAAGCCTCCGTCCGCACTCCTCCGCAACCCCCACCCTCTCGAGAATTCCTGGACCTTCTGGTTCGACAGCCCTTCCGCCAAGTCCAAACAAGCCGCATGGGGCAGTTCCATCCGACCCATATACACCTTCGCCACCGTCGAAGAGTTTTGGAGGTCAAGCTTTGATCTTTTCCCTTCCCCTCCCTCTGGCATTTACAATAACATTCACCACCCGAGCAAGTTGGGTGTGGGGGCGGACTTTCACTGCTTCAAGTATAAGATTGAGCCCAAATGGGAGGACCCTATCTGCGCCAATGGTGGAAAATGGACCATGACTTTCCAAAGGAACAAATCTGATACCAGTTGGTTGTATACGTTGTTGGCAATGATTGGAGAACAGTTTGATCACGGAGATGAAATTTGTGGAGCTGTCGTGAATGTCAGAAATAGGCAGGATAAAATTTCTATTTGGACTAAGAATGCTTCAAATGAAGCTGCTCAGATGAGCATTGGAAAGCAGTGGAAGGAGTTTCTTGATTACAATGAGACAATAGGCTTTATATTTCATGAGGATGCAATGAAGCATGAGAGGAGTGCTAAAAATAAATATGTGATATGA 729 0.4774 MVVEDSQKSTITDDQNPSRVDNDDDDLEDGEILEDADDAASAASKPPSALLRNPHPLENSWTFWFDSPSAKSKQAAWGSSIRPIYTFATVEEFWRSSFDLFPSPPSGIYNNIHHPSKLGVGADFHCFKYKIEPKWEDPICANGGKWTMTFQRNKSDTSWLYTLLAMIGEQFDHGDEICGAVVNVRNRQDKISIWTKNASNEAAQMSIGKQWKEFLDYNETIGFIFHEDAMKHERSAKNKYVI 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01601 242 MobiDBLite consensus disorder prediction 1 53 - -
Vian6g01601 242 ProSitePatterns Eukaryotic initiation factor 4E signature. 123 146 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Vian6g01601 242 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 25 232 IPR001040 GO:0003723|GO:0003743|GO:0006413
Vian6g01601 242 MobiDBLite consensus disorder prediction 1 16 - -
Vian6g01601 242 MobiDBLite consensus disorder prediction 19 36 - -
Vian6g01601 242 Pfam Eukaryotic initiation factor 4E 56 220 IPR001040 GO:0003723|GO:0003743|GO:0006413
Vian6g01601 242 SUPERFAMILY eIF4e-like 51 238 IPR023398 -
Vian6g01601 242 Gene3D RNA Cap, Translation Initiation Factor Eif4e 48 242 IPR023398 -
Vian6g01601 242 FunFam Eukaryotic translation initiation factor 4E 47 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01601 Vian-Chr6 33601919 33603746 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01601 1 241 Eukaryotic Initiation Factors Gene Family AT4G18040 59.144 9.32e-107 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01601 K03259 - gmx:100793288 401.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g01601 6 33601919 33603746 Vian6g01601 6 33601919 33603746 ECH