Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01594 ATGGAGTCAGAAAACAATCCAAAGGAGGATCCTCTCATGCTTTGGCTCACTGGTGGCCCTGGTTGCTCGGCCCTCTCTGGCCTTGTCTTAGAAATAGGTCCTCTTGGTTTTAAGCACGAGGAATATGATGGAATCCTCCCAAATTTGTTCTATAGGCAACACTCGTGGACTAAGGTGAGTAGCATTATATTTGTAGACTTGCCAGTTTTCACTGGATTCACTTATGCCACAACAGAGTCTGCTGCTCAACGAAGTGACTGGAAACTTGTTCACCAGGTCCATCAATTTCTAAGGAAGTGGCTGATAGATCATCCAACTTTTTTGTCAAACCAAGTTTACATTGGTGGCGATTCGTACTCTGGCATTCCTATTCCAGTGATTGTTCAAGAAATTTCACAAGCAAATGAAAAGGGGGTACAACCATGGATAAATCTCCAGGGATACCTGTTAGGGAATGCTGCTACTACTGGAAGTGAATATAATTATCGAATTCCTTTTTCTCATGGAATGGGACTTATTTCCGATGAACTATATGAGTCACTACAAAAAAATTGCAAAGGAGAGTACACAAAAGTAGACGTAAAAAATGTATTATGTTCTAGAGATATGGAGTCATTCAACGAGGTTTTATCAGGAGTTAATACTGTCCATATTTTGGAACCATCATGTGTGTGGCTTGATACTGAAACATCTTGGAGGAGATCACTGATTAAAAAATATCCCAGCACGAATTTCCTAAATACTCGTCTTAAATTGCCATCCTTGAGCTGTCGAAGTTATGTATACTTCCTCTGCGGTTTATGGGCCAATGATGAAAATGTTCGCACTGCATTACATATCCGTCAGGGAAGTATAGGAAAATGGCATCGTTGTACGTTTGATATACCTCACAAGAAGGATATCCCGAGCAGTTTTGAGTATCATGTAAATCTCAGTAGAATGGGCTATCGTTCGCTCATATACAGTGGCGATCATGACCTTTCGGTTCCTTTCTTGGCAACTCAAGCATGGGTCAAATCTTTAAACTACTCCATTGTGGATGATTGGAGACAATGGTATACAAATGACCAAGTTGCAGGATACACCAGGACTTACTCCAATCGAATGACATTTGCAACTGTGAAGGGTGGAGGCCACACAGCTCCAGAGTACAAACCTGAAGAATGCCTTGCCATGTACAGTAGATGGCTATCTCACAGAGCTTTGTAA 1209 0.4136 MESENNPKEDPLMLWLTGGPGCSALSGLVLEIGPLGFKHEEYDGILPNLFYRQHSWTKVSSIIFVDLPVFTGFTYATTESAAQRSDWKLVHQVHQFLRKWLIDHPTFLSNQVYIGGDSYSGIPIPVIVQEISQANEKGVQPWINLQGYLLGNAATTGSEYNYRIPFSHGMGLISDELYESLQKNCKGEYTKVDVKNVLCSRDMESFNEVLSGVNTVHILEPSCVWLDTETSWRRSLIKKYPSTNFLNTRLKLPSLSCRSYVYFLCGLWANDENVRTALHIRQGSIGKWHRCTFDIPHKKDIPSSFEYHVNLSRMGYRSLIYSGDHDLSVPFLATQAWVKSLNYSIVDDWRQWYTNDQVAGYTRTYSNRMTFATVKGGGHTAPEYKPEECLAMYSRWLSHRAL 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01594 402 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 8 386 IPR001563 GO:0004185|GO:0006508
Vian6g01594 402 FunFam Carboxypeptidase 256 401 - -
Vian6g01594 402 SUPERFAMILY alpha/beta-Hydrolases 2 399 IPR029058 -
Vian6g01594 402 Gene3D alpha/beta hydrolase 1 402 IPR029058 -
Vian6g01594 402 FunFam Carboxypeptidase 305 399 - -
Vian6g01594 402 Pfam Serine carboxypeptidase 1 398 IPR001563 GO:0004185|GO:0006508
Vian6g01594 402 FunFam Serine carboxypeptidase-like 19 1 229 - -
Vian6g01594 402 PRINTS Carboxypeptidase C serine protease (S10) family signature 369 382 IPR001563 GO:0004185|GO:0006508
Vian6g01594 402 PRINTS Carboxypeptidase C serine protease (S10) family signature 100 125 IPR001563 GO:0004185|GO:0006508
Vian6g01594 402 PRINTS Carboxypeptidase C serine protease (S10) family signature 65 75 IPR001563 GO:0004185|GO:0006508
Vian6g01594 402 PRINTS Carboxypeptidase C serine protease (S10) family signature 52 64 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01594 Vian-Chr6 33544238 33546959 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01594 264 402 Calmodulin-binding Proteins AT2G22960 63.309 1.14e-59 190