Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01563 ATGAGGCGAAACTGCAACTTGGAACTTGCCCTTTTCCCTCCCTCCGATTCTGACCCTCTCCGCCACTCCAGGGTTCAAGGAGCTACGGAAACCAGTCCGCTCCATCACCACCACCGCCAGGAACACCAACAACAACCACTCACAATTTTCTACGACGGCAAGATTTGTGTTGCAGATGTCACCGAGCTTCAGGCTAAATCTATTTTAATGCTTGCAAATGGAAAATTGGAAGAAAGAACGAGGACAGGAAGTGGGTCAGAGGCATCTTCTCCAACAGTTTTGCAATCTCCTAATCAATTGTATAGCCCTGGCAGTGGCCTTTCTATGAGAAAATCGTTGCAACGCTTCCTTCTCAAGAGAAAGAATCGGGTTCAAGAAGCCTCTCCATATCATCACTAG 399 0.4762 MRRNCNLELALFPPSDSDPLRHSRVQGATETSPLHHHHRQEHQQQPLTIFYDGKICVADVTELQAKSILMLANGKLEERTRTGSGSEASSPTVLQSPNQLYSPGSGLSMRKSLQRFLLKRKNRVQEASPYHH 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01563 132 MobiDBLite consensus disorder prediction 12 45 - -
Vian6g01563 132 ProSiteProfiles Tify domain profile. 40 74 IPR010399 -
Vian6g01563 132 Pfam tify domain 43 73 IPR010399 -
Vian6g01563 132 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 28 130 IPR040390 -
Vian6g01563 132 SMART tify_2 40 74 IPR010399 -
Vian6g01563 132 MobiDBLite consensus disorder prediction 83 107 - -
Vian6g01563 132 MobiDBLite consensus disorder prediction 76 107 - -
Vian6g01563 132 Pfam Jas motif 110 130 IPR018467 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01563 1 131 Tify Gene Family AT1G30135 40.602 8.89e-23 85.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Vian6g01563 tify 7.7e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01563 - - gmx:100500349 199.134