Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01553 ATGTTAATTGAGACTACCTGTGCTCGGGATTCTGGGATGAGTTCAGAGACCGTCAATTCCACGCAACGAACTTCCATGAGCAACGAGAGCGTTTGCAGCACCAGCTTCAGCCGCCTCTCCTTCGACCTCCCTCCTTCCTCCTCATCGCCCGAGAGCCTCTTCGTCAAGCCCCACCGCTCCTCCGACTTCGCTTACTCTGCCATCTTCCGCCGCAAGTCCGCCCTCACCTTCCGCGACTTCCACCTCCTCCGCCGCATCGGCGCTGGCGACATCGGCACCGTGTACCTCTGCCGCCTTCGCCACGACGAGGACGAGTGCTTCTACGCGATGAAGGTGGTGGACAAGGAGGCCGTGGCGCTGAAGAAGAAGGCGCAGAGAGCGGAGATGGAGAGAAAGATTCTGAAGATGGTGGACCACCCCTTCCTCCCTACGCTCTACGCGGAGTTCGAGGCCTCGCATTTCTCTTGCATTGTGATGGAGTATTGCTCCGGTGGAGACTTGCACTCCCTTCGACACAACCACCCTAACAAACGCTTCTCTCTCTCCTCTGCCAGGTTTTACGCGGCTGAAGTACTGGTGGCGTTGGAGTATCTCCACATGCTGGGAATAATCTACAGGGATCTAAAGCCAGAAAACGTGTTGGTCAGATCAGACGGTCACATCATGCTTTCTGATTTCGATCTCTCTCTGTGCTCCCATGCAATCCCCGCCGTTGAATCCCCTGACTCTTCTCTAGATCCTGCATTCACACGCACGTTACCCTACACCCGTCAGTACTCCACTCCCTTCTCCTGCCTCTCCAACCGCGTCTTCCGCTCCAAGAAGGTCCAAACCCTACAACCCAACCGCCTCTTTGTGGCCGAACCGGTTGGGGCTCGCTCCTGCTCCTTCGTGGGGACGCACGAGTACGTCTCACCGGAAGTGGCCTCCGGAAACTCCCACGGCAACGCCGTCGACTGGTGGATCAACACCACCCTTCCTAAACGAATTGTTGGAAATGAGGTGAAAGCAAAGAAGGGAATGAAGATGGCGGTGAGTGACGGTGGCACGAAAATGAGTGAAGAGGTGAAGAAATTGACACGTGGCTGTGAATCTCGAAAGAGAAGAGAAAAGAATAGTAAATTAGCTGTGGCAACATACAACCTCTTCATGTGA 1155 0.5515 MLIETTCARDSGMSSETVNSTQRTSMSNESVCSTSFSRLSFDLPPSSSSPESLFVKPHRSSDFAYSAIFRRKSALTFRDFHLLRRIGAGDIGTVYLCRLRHDEDECFYAMKVVDKEAVALKKKAQRAEMERKILKMVDHPFLPTLYAEFEASHFSCIVMEYCSGGDLHSLRHNHPNKRFSLSSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSHAIPAVESPDSSLDPAFTRTLPYTRQYSTPFSCLSNRVFRSKKVQTLQPNRLFVAEPVGARSCSFVGTHEYVSPEVASGNSHGNAVDWWINTTLPKRIVGNEVKAKKGMKMAVSDGGTKMSEEVKKLTRGCESRKRREKNSKLAVATYNLFM 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01553 384 SMART serkin_6 80 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian6g01553 384 ProSiteProfiles Protein kinase domain profile. 80 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian6g01553 384 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Vian6g01553 384 Gene3D Transferase(Phosphotransferase) domain 1 162 230 - -
Vian6g01553 384 Gene3D Transferase(Phosphotransferase) domain 1 294 322 - -
Vian6g01553 384 PANTHER FLIPPASE KINASE 1-RELATED 19 321 - -
Vian6g01553 384 MobiDBLite consensus disorder prediction 1 26 - -
Vian6g01553 384 FunFam protein kinase PINOID 2 78 161 - -
Vian6g01553 384 Gene3D Phosphorylase Kinase; domain 1 78 161 - -
Vian6g01553 384 FunFam protein kinase PINOID 162 230 - -
Vian6g01553 384 MobiDBLite consensus disorder prediction 8 26 - -
Vian6g01553 384 SUPERFAMILY Protein kinase-like (PK-like) 60 321 IPR011009 -
Vian6g01553 384 Coils Coil 110 130 - -
Vian6g01553 384 Pfam Protein kinase domain 80 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01553 Vian-Chr6 33150990 33156795 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01553 10 321 AGC Kinase Gene Family AT2G34650 71.207 8.98e-155 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Vian6g01553 Pkinase 6.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01553 - - gmx:100795536 567.77