Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01544 ATGACCCCTCTCTTATCCTCTTTCTCCCTCACCGACATAGCCTCCTACCTCGTATGCTTCCTCCTCCTCCTCATTCTCCTCGAACAGATCTCCTACCTTTCCAAGAAGGCTTCCATCCCAGGACCCTCCTTCGTCGTCCCCTTCCTTGGAAACGCAATCCCATTGGTCCGTAATCCAACCAACTTCTGGGACCTTCAGTCCTCTCTGGCAAAGTCCACCCCTTTGGGCTTCTCCGCCAACTACATAATCGGCAACTTCATCGTTTTCATCAGAGACACCGAACTCTCCCACAAGGTCTTCGCCAATGTCAGGCCCAACGCTTTCCACCTGGTGGGCCACCCCTTCGGCAAGAAGCTATTCGGCGAACACAACCTTATCTACATGATGGGTCAAGAACACAAGAATCTCCGCCGTCGCATCGCCCCCAACTTCACCCCCAAAGCCCTCTCCACCTACACCTCGCTCCAGCAGATTATCATCCTCGATCACCTCAAGTCCTGGGTTGCCAAAGCTCAAGCCCAAACCGATTCCATTCCGCTCCGTATTCTGGCCCGTGACATGAATCTCGACACCTCCCAGACCGTCTTCGTGGGCCCCTACTTGGGCCTCAAAGCCAGAGAGCGCTTCGAGAGGGATTACTTTCTATTCAACGTTGGCCTTATGAAGCTTCCGTTTGATTTCCCCGGCACCGCGTTTCGAAACGCGAGGCTCGCCGTGGACCGGCTCATCGAAACGCTGGCCACCTGCACCGAGATGAGCAAAACCAGGATGCAGAAAAGGGAAGAGCCTTCGTGTCTGATTGATTACTGGATGCAGGAAACGCTCAGGGAAATCGAGGAGGCCAAGCTCACCGGAGAGCCGGCGGCACCGTTCTCCACCGACGCCGAGATTGGTGGTTACCTCTTTGATTTTCTCTTTGCGGCGCAGGACGCGTCCACTTCGTCGCTGCTGTGGGCGGTGGCGCTGCTGGATTCCCATCCGGAGGTGCTGGCGAAGGTTAGGGCAGAGGTGGCAGGAGTCTGGTCGCCGGAGTCGGACGAGCTGATTACCGCGGAGATGCTCCGGGAGATGAAGTATACGCAGGCGGTGGCTCGTGAGGTAGTGAGGTTCCGGCCGCCGGCGACGCTGGTGCCGCATATCGCGGCGGAGAGGTTCGCGCTGACGGAGTCGTACACGATACCGAAGGGGGCGATCGTGTTCCCGTCGGCATTCGAGTCGTCGTTTCAGGGGTTCAGTGAACCGGAGCGGTTCGACCCGGAGCGGTTCTCGGAGGAGAGACAGGAGGACCAAGTATTTAAAAGAAACTTTCTGGCCTTCGGTGCCGGGCCCCACCAGTGTGTGGGTCAAAGGTACGCATTGAATCATCTCGTTCTCTTCATCGCGTTGTTCGCCACGTTGATCAATTTCAAGAGGGACAGAACGGACGGTTGCGATGAGATCGCGTACGTACCCACCATATGCCCTAAAGACGATTGCAGGGTGTTTCTCTCGCAACGCTGCACACGATATCCTTCCTTCCCTGCAGTCGATGACCTGATGAAATGA 1545 0.5657 MTPLLSSFSLTDIASYLVCFLLLLILLEQISYLSKKASIPGPSFVVPFLGNAIPLVRNPTNFWDLQSSLAKSTPLGFSANYIIGNFIVFIRDTELSHKVFANVRPNAFHLVGHPFGKKLFGEHNLIYMMGQEHKNLRRRIAPNFTPKALSTYTSLQQIIILDHLKSWVAKAQAQTDSIPLRILARDMNLDTSQTVFVGPYLGLKARERFERDYFLFNVGLMKLPFDFPGTAFRNARLAVDRLIETLATCTEMSKTRMQKREEPSCLIDYWMQETLREIEEAKLTGEPAAPFSTDAEIGGYLFDFLFAAQDASTSSLLWAVALLDSHPEVLAKVRAEVAGVWSPESDELITAEMLREMKYTQAVAREVVRFRPPATLVPHIAAERFALTESYTIPKGAIVFPSAFESSFQGFSEPERFDPERFSEERQEDQVFKRNFLAFGAGPHQCVGQRYALNHLVLFIALFATLINFKRDRTDGCDEIAYVPTICPKDDCRVFLSQRCTRYPSFPAVDDLMK 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01544 514 Gene3D Cytochrome P450 31 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g01544 514 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g01544 514 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g01544 514 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g01544 514 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g01544 514 SUPERFAMILY Cytochrome P450 35 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g01544 514 PANTHER CYTOCHROME P450 26 39 463 - -
Vian6g01544 514 CDD CYP61_CYP710 76 492 - -
Vian6g01544 514 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g01544 514 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g01544 514 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g01544 514 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g01544 514 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g01544 514 FunFam Cytochrome P450 61 29 499 - -
Vian6g01544 514 Pfam Cytochrome P450 41 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g01544 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01544 Vian-Chr6 33065104 33066648 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01544 13 506 Cytochrome P450 AT2G34500 66.397 0.0 693
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01544 K09832 - gmx:100808148 916.761