Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01543 ATGAATTCCAATGTATTGACGATGAGCGAGAAGGGGGAAAATAAGGAAATGGTGACCGACAACAACCCTTATTATGGCACATTCCAAGGCGTCACCAATTATTATCCTCCGTCTTTTCCCTCCGCTTACCACCAACAACAACCCTACCATCTTCTTCCAGTTTATGCCGTTCCTGAAAGAAGGCCATTGAGAGAACGTCGACTTCCCTGTTGTGGACTTGGTGTAGGCTGGGTTTTGTTCATAATTGGTTGGTTTCTTGGTGGTGTTCCTTGGTACATTGGAACTGTTGTTTTAGTATTTGTGCAAATGGATCATAGAGAAAAACCCGGACTCATTGCATGTGCATTGGCTTCGTTGGTTACTTTGATGGTGGTTGCCCTTGGTGTCACACAGGCAGATCTTCAAAAGTTCACATGA 417 0.4436 MNSNVLTMSEKGENKEMVTDNNPYYGTFQGVTNYYPPSFPSAYHQQQPYHLLPVYAVPERRPLRERRLPCCGLGVGWVLFIIGWFLGGVPWYIGTVVLVFVQMDHREKPGLIACALASLVTLMVVALGVTQADLQKFT 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01543 138 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 8 132 IPR044804 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01543 Vian-Chr6 33045198 33046682 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01543 24 130 Cytoplasmic Ribosomal Protein Gene Family AT1G29970 32.000 1.59e-23 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01543 - - var:108342711 278.485