Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01516 ATGAACCAGTACCACATCTACGAAGCCATCGGTCGCGGCAGATACTCCACTGTTTACAAAGGCAGGAAGAAGAAGACTATCGAATATTTCGCCATCAAGAGTGTTGATAAATCGCAAAAAACTAAGGTTCTTGAAGAGGTCAGGATTCTTCACACGTTGGATCATATAAATGTGCTGAAGTTTTATGATTGGTATGAAACTTCTGCTCATTTATGGTTGGTTTTAGAGTATTGCGTAGGAGGGGATTTGCTCTCCATATTGCGACAGGATAGTAAATTTCCAGAAGAGTCTGTTCACGATCTTGCTCTTGATTTACTGAAAGCTTTACAGTTTTTACACTCAAATGGAATAATTTATTCCGACTTGAAACCATCCAATATTCTACTGGATGAAAATGGATGCGCAAAGCTATGTGATTTTGGATTAGCGAAAAAATTGAGAGATATAACAAAAGGTTTTTCTTCTTCGTTACCACGAGCAAAACGCGGAACACCTACTTACATGGCTCCGGAGCTTTTTGAAGATGGTGGAGTGCATTCTTACGCTTCTGACCTCTGGGCATTAGGATGTGTCCTATATGAATGTTATGCTGGGAGACCACCCTTTGTAGGAAGGGAATTTACTCAGCTTGTGAAATCTATCCTTTCAGATCCTACTCCACCACTTCCGGGTAATCCCAGCAGACCTTTTGTTAATTTAATTAATTCCCTTTTGGTAAAGGATCCAGCTGAAAGAATACAATGGTCTGAGCTTTGTGGACATGCCGTTTGGAGAACAAAAGTTCCTCCGGTGCCTCTTCCTGCTCAACCTGCATTTGATGATATGGTAGAGCTACACACTAAATCTGTCTTATCAGAAAATAAATCTTCGCATAACAGGACACCTCCCAAATATCGTGAAAAGGATGTCAAAGGGGTCTTGAAGAAAGATGAGAACTCTATTTTAGGATCTAGAGGCCTTGAGACACCAACAAGGGCAACACCAAATGGCCCCAGAACTCAGATAAAAGGGTCTGGTAGAACAAATGACGTAAAGCAGAAAGATCATTCTAATATTAGCAAGGGTGTGAATCTATTAAGATTGTCAAGAATAGCAAAAACAAATTTACAGAGGGAAAATGAGAAAGAAAACTATCGACGCCCCTTGCCTAATAACTCTGAGAATGATTCTGAAGTTAAAATTGAGAACACTGACATGGAACTTAATTTTAATGAGAATACCGAAGATGATACACATGAAGAAGCTGATGGCAACGAACCTTGTGAAAAAATAGACCATCATTTTCTGAATCAGGGAAAAACAGAGGAGATTGAAAATACTGCACACCAGTTCGATACCCCATCTGCTGTTAACCCTCCCGTCTCAGATGATCTTCATGAATTAACTCCTGACATGTCTGGTATTTCTCCCAGTGTGAGCCCTCAGGTGAAGAAGCATAGAGCTAAAGAAGACTCAGGATCTGGCCTTGACTCTGATTCTTCAAGGTTGTCTAGCAACCTTTCCCAGGTTCTTTGGCATTCATCTGATCTCTCAGTCAGACCTGTAATGCCTAGCAGAAAAGTTGATAAAGTCTTAGAAGTCATTCCTTCACTCCCTTTTGAGGCATTGCAAGCGTCTGATTTTGTTAAGATGCCTAAAGAGAAATTGGAGGCAGTCCACAACCGGATATTAGCCATTTTGAACGGAAATACCAGCATTGGAGAGAAACAAAATGTGATTAGGTACCTCGAGATGTTGAGCATTAATGCTGATGCAGCTAATGTCTTGACCAATGGGCCAATTATGCTTACGCTTGTAAAATTGCTTCGTCAATCCAAGGCATCAGCTTTGCGTGTTCAACTTGCTTCATTGATTGGTCTGTTGATTAGGCACTCCACTTTTGTTGATGACAGTTTGTCTAATTCTGGAATTTTAGGTGCACTGACTGATGGCCTTAGAGACAGGCAGGAAAAAGTAAGGAGGTTTTCAATGGCTGCTTTGGGTGAGTTGCTATTTTATATATCCACTCAAAATGCAGACTGCAAGGATAACAATCAACTTGAATCTCCATCAAAGGACAATAGGACAACAACATATGGCTGGCAGGTTCCAAATTCGTTAATTTCGCTTGTGTCATCAATGTTGAGGAAGGGCGAGGATGATATAACTCAATTGTATGCATTGAGAACAATTGAGAATATTTGCAGTCAAGGAGGGTTCTGGGTGGGGCGATTGGCCAGTCAAGATGTTTTTAGTAATCTCTGTTATATCTATAGGGCGGCAGGGAAACAAGAGAGTATGAGGCTCACTGCAGGATCATGCTTGGTGCGCCTTGTTCGTTTTAATCCACCTAGCATTCAGTCTGTTATTGAGAAACTCTCATTCAAGGACCTAGCTTCTACTCTTGTAAAGGGAAGTCCACGAGAGCAGCAAATCAGCTTAAATCTTCTTAACATAGCAATGCTTGGGAGTCACTTGTTCACAAATATTGGAAGATACCTTGGAAGAGATGACTTCCAAATAACCCTTCTTCGAATTTTCGAGTCTCTCACAGAGGAATCTCCTATGATTCTTGTCAATGCTGACATTTTCATACGTGAAATCCTCCCTAGTTTGACTGTTCTCTACAAGGGTAACAAGGATGGTGATGCCAGGTTTTTGTGCCTTAAAATTCTTTTTGATGTGATGATCATTCTTTTGAGTGAACCAATTGAAGAAGAGCAACGATTAAAGGATCTTAAATTCATATCAAATACCCGTTTTCTTCCGCTCTACCCAACCTTGATTGAAGATGAAGACCCTATTCCTATTTATGCCCAGAAACTTCTTGTTATGCTACTGGAGTTCAGTTTTATTACAATTCCAGACATTCTACATATGAAGGCAATTTCACAATGCTTCGAGTTCTTGCTCGGTGATCTCTCAAATGCAAATGTGAATAATGTTAAACTGTGTCTTGCTCTAGCTTCTGCTCCCGAGATGGAGTCGAAATTACTCTCTCATTTAAAGGTGGTTAGGAGGATTGGCAACTTTCTTGAGTTTGTACATGCAAAGGGCATGGAAGATTTGCTGGAACCCACTCTTGGGCTGTGTAGAGCTTTTATAGCACGTTCAGTCGGCTGTGCAAAAGGCTTGAGCAGCTCAAGAGAACCAAATCTCTTAGGTGACTATCCTCCCGAGTTGAGTGGTGGTGCTGTTGATCCCCAGCAATGCATAAAAGATATCGCAGACTTTGGAAGCAATTTTGGTGTCTTGCTAGAGTTGAGTGCCTCTGCAGAAACCAGTATTGCCGATATAGCTTCTGAATGTGTTGTTTTACTGTTCAAGGCAGCTCCTAGAGAAGCAACCACTGGTATACTAACCAATCTTCCCAAGGTCACTGTGATCCTAGAGAGCTGGAATAGAGGCATTCCTCACTTGATGGTGCAGCGAATGCTTCATTCTTTAGGTTATGCTTGCAAGCAATACTTACTGCATGCAATGATATTGTCAATATCTAAATCAGAGATTTCAAGAATTGAAGTTGTAGTTTCTGAAATCAAAAGTTCAGGTGTACCACTCTTAGCCAAAACTGCTGGGCTAGCAGCCCTGGAGTTGCAGCGGTTGCCTCGCTGCATTTGA 3600 0.4117 MNQYHIYEAIGRGRYSTVYKGRKKKTIEYFAIKSVDKSQKTKVLEEVRILHTLDHINVLKFYDWYETSAHLWLVLEYCVGGDLLSILRQDSKFPEESVHDLALDLLKALQFLHSNGIIYSDLKPSNILLDENGCAKLCDFGLAKKLRDITKGFSSSLPRAKRGTPTYMAPELFEDGGVHSYASDLWALGCVLYECYAGRPPFVGREFTQLVKSILSDPTPPLPGNPSRPFVNLINSLLVKDPAERIQWSELCGHAVWRTKVPPVPLPAQPAFDDMVELHTKSVLSENKSSHNRTPPKYREKDVKGVLKKDENSILGSRGLETPTRATPNGPRTQIKGSGRTNDVKQKDHSNISKGVNLLRLSRIAKTNLQRENEKENYRRPLPNNSENDSEVKIENTDMELNFNENTEDDTHEEADGNEPCEKIDHHFLNQGKTEEIENTAHQFDTPSAVNPPVSDDLHELTPDMSGISPSVSPQVKKHRAKEDSGSGLDSDSSRLSSNLSQVLWHSSDLSVRPVMPSRKVDKVLEVIPSLPFEALQASDFVKMPKEKLEAVHNRILAILNGNTSIGEKQNVIRYLEMLSINADAANVLTNGPIMLTLVKLLRQSKASALRVQLASLIGLLIRHSTFVDDSLSNSGILGALTDGLRDRQEKVRRFSMAALGELLFYISTQNADCKDNNQLESPSKDNRTTTYGWQVPNSLISLVSSMLRKGEDDITQLYALRTIENICSQGGFWVGRLASQDVFSNLCYIYRAAGKQESMRLTAGSCLVRLVRFNPPSIQSVIEKLSFKDLASTLVKGSPREQQISLNLLNIAMLGSHLFTNIGRYLGRDDFQITLLRIFESLTEESPMILVNADIFIREILPSLTVLYKGNKDGDARFLCLKILFDVMIILLSEPIEEEQRLKDLKFISNTRFLPLYPTLIEDEDPIPIYAQKLLVMLLEFSFITIPDILHMKAISQCFEFLLGDLSNANVNNVKLCLALASAPEMESKLLSHLKVVRRIGNFLEFVHAKGMEDLLEPTLGLCRAFIARSVGCAKGLSSSREPNLLGDYPPELSGGAVDPQQCIKDIADFGSNFGVLLELSASAETSIADIASECVVLLFKAAPREATTGILTNLPKVTVILESWNRGIPHLMVQRMLHSLGYACKQYLLHAMILSISKSEISRIEVVVSEIKSSGVPLLAKTAGLAALELQRLPRCI 1199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01516 1199 Gene3D Transferase(Phosphotransferase) domain 1 1 313 - -
Vian6g01516 1199 MobiDBLite consensus disorder prediction 310 353 - -
Vian6g01516 1199 MobiDBLite consensus disorder prediction 444 495 - -
Vian6g01516 1199 Pfam Protein kinase domain 4 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian6g01516 1199 SUPERFAMILY Protein kinase-like (PK-like) 1 283 IPR011009 -
Vian6g01516 1199 MobiDBLite consensus disorder prediction 317 340 - -
Vian6g01516 1199 MobiDBLite consensus disorder prediction 367 401 - -
Vian6g01516 1199 CDD STKc_ULK4 3 257 - -
Vian6g01516 1199 ProSiteProfiles Protein kinase domain profile. 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian6g01516 1199 ProSitePatterns Serine/Threonine protein kinases active-site signature. 117 129 IPR008271 GO:0004672|GO:0006468
Vian6g01516 1199 SUPERFAMILY ARM repeat 698 967 IPR016024 -
Vian6g01516 1199 SUPERFAMILY ARM repeat 551 786 IPR016024 -
Vian6g01516 1199 Gene3D - 545 864 IPR011989 -
Vian6g01516 1199 FunFam Aurora kinase A 1 81 - -
Vian6g01516 1199 PANTHER SERINE/THREONINE-KINASE ULK4-LIKE PROTEIN-RELATED 828 1196 IPR044591 GO:0000911|GO:0000914|GO:0008017
Vian6g01516 1199 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Vian6g01516 1199 MobiDBLite consensus disorder prediction 367 382 - -
Vian6g01516 1199 SMART serkin_6 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01516 Vian-Chr6 32784309 32790735 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01516 2 258 MAP Kinase Kinase Kinase AT3G13530 32.197 6.49e-36 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_ULK4 Vian6g01516 Pkinase 7e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01516 K17545 - gmx:100817590 1428.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g01516 6 32784309 32790735 Vian6g01516 6 32784309 32790735 ECH