Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01515 ATGGAGTGCAATAAAGAAGAGGCCGTAAGGGCCAAGGAAATTGCTGAAAAGAAAATGCAAAACAAAGATTTCAGTGGGGCTCAAAAATTTGCTCTTAAGGCTCAACAGCTATATCCTGATTTGGAGAATATTAATCAAATGCTTATTGTTTGTGATGTGCATTGCTTTGCTGATCAGAAATTGTTTGGCAATGAGACGAACTGGTATAAAATTCTTCAAATTGAGCTGACGGCTGATGATGCAACAATTAAGAAGCAATACAGGAAGTTTGCTCTCCAACTTCATCCTGACAAAAACAAGTTTTCTGGTGCAGAAGCGGCATTTAAGCTGATTGGGGAAGCTCAAAGAGTTCTTTTAGATAGAGAAAAACGAACTAGGCTTGATATGAATCTGGGCAGGGCTCCAATGAACAGAGCTACCATGCCATCTCATCATCATCAGAATGTTCAGATGAATTTTAATCATGTAATGCAAAACACTGTCAGACCCAGTTTTACAAACTTAAATCCTCATCAGCAACAACAATCTGGACAGACATCTCATCAGGGGCCTAATCGTGGCCGCCCTACTTTTTGGACCATGTGCTCACATTGTTCTGTTAGATATGAGTATTTTCTGGAAGTTTTACACAGATCTCTTCGCTGTCAACATTGCAATAGGCCCTTCGTTGCATTGGATATACAAAGTACAGCACCATCAACTAATTCAACTCAGCAAGCTTTTGGTGCACAGAACCATAGCCAGAATCATAGCGCTTTCAATGTTGGTGTTGGATCTCAAGGTAATGTGCATACTCACAGATCACGCACTGAATCACACAAAAAAAAACGCCATCCTGTGGATGACCTTGTAAAGCCAAATGGAAAGAGAAGGAGAAAGCGGGCAGCTGAATTCAGTGAAAGTTCTGAATCTGTGGGCAGTACTGATTCGGAATCTGAAGAGGAGATTCGTTTTGACAATGATGCTGTTCCTGGTTTTTCTACCCACATAGAAGAGAATCCACGTAGATCTACGCGACAAAAGCATCAGGTTTCCTACAAGGAAAATGTGAGTGATGATGAAGGGAGTGGATCTCCATCTGGTGCTGGAGAAGAGGAGCATGAGGAGGCAGCTAAAAGTAATGAACAAAATGGTTTGGCTGCTGATAAGAAAGATCAGGGACAGGAAAAGGGGAAGCAGAACTTTTATTCTGAAGAGAGCGTTCAAAATATAAAAGAGGAGCTTAAGGAGGTGAGGGAAAAAGAGGCAGTGGGTAGCTCAAACACAGACAAAACTTCAGAGCATTCACCCTTGAAATCAGCAGATCAACCAGCTCAGTTTATTTATCCAGATGCAGAATTCAGTGACTTTGACAAAGACAAGAAAGAGGGGTCTTTTGCTGCTGGGCAGATTTGGGCTATTTACGATACTGTTGATGGTATGCCTCGATTCTATGCTTTAATCAGAAAAGTTCTCTCTCCTGGATTCAAGTTGCGAATAACATGGTTTGAACCAGATGCAGAAGAGAAAGATGAAATCCACTGGATAAATGAGCAATTGCCAGTTGCTTGTGGGAAACATAGACTTGGTAATACAGAAAGTACTGAAGATCCACTGATGTTCTCCCATCTTATTGTTTGTGAAAAGATTGGCCGCAGTAGGTATGAAGTATATCCTAGAAAGGGAGAAACTTGGGCTCTTTTTAAAAATTGGAATATCAAATGGCATATGGATGCGGAGTCGCATAGGCAGTATGATTTTGAATTTGTCGAAATCTTATCAGATTACATTGAAGGTATGGGAGTAGTTGTTGCATACCTGGGTAAATTGAAAGGTTTTACATCTCTCTTCTCTCAATTGGATGGAGGCAAGCGTACCATTCAAATTCCATCAGCCGAGTTATTCAGATTTTCTCACAGGGTTCCATCTTTTAAAATGACTGGTCGGGAAAAAGTTGGTGTTCCTGTAGGGTCTTGGGAACTTGATCCTGTATCCCTGCCAAGGAATATTGAGGAAATTGATGTTCCTGGAGATTTGAATTTAAATGTCGGACATTGTCCATCTAGTGGGAATGGCTCAAGGTCTTCAGATATGTCGAAATTTGCCAGGGAGGTAGATGCATCTACTGCAAAGCTTAATTTGGAAAGAAACAATTCTTCAAAGGAGAACAAGGATCCCGTTGAACATACTGGTAGTGATCTTTCATCCTCAGCCGCAGAAGCTTTTGAAATTCCAGATCCCGAGTTCTATAATTTTGACGGTGGGAGGTCCATAGAAAAGTTTCAGGTTGGTCAGATTTGGGCATTTTACGGGGATGAGGATGGACTACCAAAATACTATGGTCAGATTAAGAAGATTAGGATCAGACCAGAACCTGAGTTGCAAGTTACTTATCTTACTAACTGCTGGATACCAGAGAACTGTGTCAGATGGGAAGATAAAGACATGCTTATTTCCATTGGCAGATTTAAAATCAAAACGAGCGCCAGTCCCTACACTTATACTGACACCCGTTCTATTTCACATCAGGTGCAGACTATTACTGACGGTAAGAAGGAATATGAAATTTTTCCAAGGAAAGGCGAAATTTGGGCATTGTACAAGAATTGGACGACTAAAATAAAACGTTCTGATCTGGCAAATTTGAAGTATGACATAGTGGAAGTTGTTGGAGAAAATGATTTGTGGATGGATGTTGTACCTTTGGAGTTGGTAAGTGGTTATAAGTCAGTTTTTAAGTGCAACTTAAATGCACGATCAGCTAGGACCATGAAAATACTTTGGAAAGAGTTGCTCAGGTTCTCCCACCAAATCCCTGCCTTTAAATTAACAGAAGAACGTGGGGGCAATCTGAGAGGCTTCTGGGAGCTTGATCCTGGAGCATTACCCCATTATTATTTTAGCAGCAAATAA 2892 0.4084 MECNKEEAVRAKEIAEKKMQNKDFSGAQKFALKAQQLYPDLENINQMLIVCDVHCFADQKLFGNETNWYKILQIELTADDATIKKQYRKFALQLHPDKNKFSGAEAAFKLIGEAQRVLLDREKRTRLDMNLGRAPMNRATMPSHHHQNVQMNFNHVMQNTVRPSFTNLNPHQQQQSGQTSHQGPNRGRPTFWTMCSHCSVRYEYFLEVLHRSLRCQHCNRPFVALDIQSTAPSTNSTQQAFGAQNHSQNHSAFNVGVGSQGNVHTHRSRTESHKKKRHPVDDLVKPNGKRRRKRAAEFSESSESVGSTDSESEEEIRFDNDAVPGFSTHIEENPRRSTRQKHQVSYKENVSDDEGSGSPSGAGEEEHEEAAKSNEQNGLAADKKDQGQEKGKQNFYSEESVQNIKEELKEVREKEAVGSSNTDKTSEHSPLKSADQPAQFIYPDAEFSDFDKDKKEGSFAAGQIWAIYDTVDGMPRFYALIRKVLSPGFKLRITWFEPDAEEKDEIHWINEQLPVACGKHRLGNTESTEDPLMFSHLIVCEKIGRSRYEVYPRKGETWALFKNWNIKWHMDAESHRQYDFEFVEILSDYIEGMGVVVAYLGKLKGFTSLFSQLDGGKRTIQIPSAELFRFSHRVPSFKMTGREKVGVPVGSWELDPVSLPRNIEEIDVPGDLNLNVGHCPSSGNGSRSSDMSKFAREVDASTAKLNLERNNSSKENKDPVEHTGSDLSSSAAEAFEIPDPEFYNFDGGRSIEKFQVGQIWAFYGDEDGLPKYYGQIKKIRIRPEPELQVTYLTNCWIPENCVRWEDKDMLISIGRFKIKTSASPYTYTDTRSISHQVQTITDGKKEYEIFPRKGEIWALYKNWTTKIKRSDLANLKYDIVEVVGENDLWMDVVPLELVSGYKSVFKCNLNARSARTMKILWKELLRFSHQIPAFKLTEERGGNLRGFWELDPGALPHYYFSSK 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01515 963 Gene3D DnaJ domain 64 179 IPR036869 -
Vian6g01515 963 MobiDBLite consensus disorder prediction 275 299 - -
Vian6g01515 963 MobiDBLite consensus disorder prediction 677 691 - -
Vian6g01515 963 MobiDBLite consensus disorder prediction 332 349 - -
Vian6g01515 963 MobiDBLite consensus disorder prediction 705 731 - -
Vian6g01515 963 Pfam Domain of unknown function (DUF3444) 438 643 IPR024593 -
Vian6g01515 963 Pfam Domain of unknown function (DUF3444) 733 939 IPR024593 -
Vian6g01515 963 MobiDBLite consensus disorder prediction 674 693 - -
Vian6g01515 963 SUPERFAMILY Chaperone J-domain 64 151 IPR036869 -
Vian6g01515 963 PRINTS DnaJ domain signature 69 87 IPR001623 -
Vian6g01515 963 PRINTS DnaJ domain signature 87 102 IPR001623 -
Vian6g01515 963 PRINTS DnaJ domain signature 103 123 IPR001623 -
Vian6g01515 963 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 695 - -
Vian6g01515 963 Pfam DnaJ domain 67 128 IPR001623 -
Vian6g01515 963 CDD DnaJ 67 120 IPR001623 -
Vian6g01515 963 SMART dnaj_3 66 123 IPR001623 -
Vian6g01515 963 MobiDBLite consensus disorder prediction 163 186 - -
Vian6g01515 963 MobiDBLite consensus disorder prediction 233 437 - -
Vian6g01515 963 MobiDBLite consensus disorder prediction 233 265 - -
Vian6g01515 963 MobiDBLite consensus disorder prediction 402 421 - -
Vian6g01515 963 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Vian6g01515 963 MobiDBLite consensus disorder prediction 360 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01515 Vian-Chr6 32770162 32773053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01515 4 232 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 35.897 4.19e-30 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01515 - - gmx:100779228 1478.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g01515 6 32770162 32773053 Vian6g01515 6 32770162 32773053 ECH
Vian1g00222 1 1924686 1927562 Vian6g01515 6 32770162 32773053 PCT