Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01310 ATGCCACCATCGTGCCTTCCAAAACGCAACAACAACAAGCACAAGAGCATGCCTCTCCTCCTCTCTCTCCCCGGGTTCGATTGTGTCGGTAATCACCATTATGTTCGAATTGATACAAATCGCGATGCTCAGTCCTTGCTTCCTCTAACAGTGAAGCAAATATACGATGCGCTTCAAACAAACGATGATAAAGCCAATTTGATTGTTGACGGTGTGGACGTTAATAATGTACGAAGGGTATGCAACAAAGCCGAACGAGTTACTGATGTTACGTTTGTGCTTGATGATGGTACTGGAAGATTAAATGTAATAAATGGTTTCATGAAGCTACTGATACAAATGAAGCAGAGGCTATCTTTGGTCATGGCAAAACCTTTTGCTGGGATTCAGTTTCCTACTATTCCTGTCGACAACAAGGCACATTGTAAGATTCTATATCTCGAATACACGTATACATAG 459 0.4183 MPPSCLPKRNNNKHKSMPLLLSLPGFDCVGNHHYVRIDTNRDAQSLLPLTVKQIYDALQTNDDKANLIVDGVDVNNVRRVCNKAERVTDVTFVLDDGTGRLNVINGFMKLLIQMKQRLSLVMAKPFAGIQFPTIPVDNKAHCKILYLEYTYT 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01310 152 PANTHER REPLICATION PROTEIN A-RELATED 27 104 IPR040260 -
Vian6g01310 152 SUPERFAMILY Nucleic acid-binding proteins 46 101 IPR012340 -
Vian6g01310 152 Gene3D - 39 106 IPR012340 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01310 40 102 Core DNA Replication Machinery Family AT2G24490 47.761 3.46e-14 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01310 K10739 - gmx:100782819 90.8929