Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01294 ATGTCTCAAACCTTAACTCACACCATGCACCGTTCACCTGAACCTCTGTCCCTTCAGGTGGACAACAACCACTCTGGAAGAAGCACCACCGTCACTGAGATAGAGGAAGATAACTCCTCAGACTTCCCCTTCAACAATGATTCTCTTGTTACCATTAACGAACAAGACAAGGAGGAGGAAGACACTGTCTATGTCGCCGTCGGAAAGAGCCCCAGCAGCATCGAAGCCTTGTCATGGACCCTCACCAACTTCACCACTCCATCTACCATTCTCTATCTCATACACGTTTTCCCAGAGATCAAGCACCTTCCAAATCCATTGGGAGTTGGAGTGATTCCGAAGGAGCAAGTGAGTCCTGAGCAGGTAGAGAGCTACATGGCACAAGAAAGAGGCAAGAGAAGAGAGCTCCTTAACAAATTCCTGCAATTATGTTCTGCTTCCAAGGTTAAGGTCGAAACAATCTTGATTGAGAGTGACTTGATTGCAAAGGCTATCATCGACCTCATTCCCATTCTTCAAATAAGAAAACTAGTGATTGGAGCAAGCAAATCTCAAATACGAAAATTGAGATCAAAGAAAGGGAGTGGCATAGCTGATCAGATACTTCAGAATGCTCCGGAAAGTTGCAATGTGAGTATTGTATGTGAAGGAAAGGAAGTAAATGAACAGATAGCCGCTGCCATTGCCACTGATACTTCCATGTCCCAGAAAAACAAGCATCAGCAAAATGCTTCGGTTTCGTGTGTTTGCTTCAACTTTTAA 762 0.4449 MSQTLTHTMHRSPEPLSLQVDNNHSGRSTTVTEIEEDNSSDFPFNNDSLVTINEQDKEEEDTVYVAVGKSPSSIEALSWTLTNFTTPSTILYLIHVFPEIKHLPNPLGVGVIPKEQVSPEQVESYMAQERGKRRELLNKFLQLCSASKVKVETILIESDLIAKAIIDLIPILQIRKLVIGASKSQIRKLRSKKGSGIADQILQNAPESCNVSIVCEGKEVNEQIAAAIATDTSMSQKNKHQQNASVSCVCFNF 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01294 253 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 21 252 - -
Vian6g01294 253 MobiDBLite consensus disorder prediction 1 45 - -
Vian6g01294 253 CDD STK_N 62 217 - -
Vian6g01294 253 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 62 212 - -
Vian6g01294 253 Gene3D HUPs 49 231 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01294 Vian-Chr6 30567888 30569308 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01294 66 218 Plant U-box Gene Family AT5G57035 33.333 1.04e-16 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01294 - - gmx:100781056 370.933