Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01268 ATGACAATGGCTTCGGAGATTGAAATTTCTCCGGCCGACGCTCGCAAGGCTCCCGGCAAAGAGCAGCAAGCGGCCGGCGTCGGAATCCTTCTGCAGATCATGATGCTCGTCCTGTCCTTCGTCCTCGGTCACGTTCTCCGTCGCAAGAAGGTTTACATCATCCCCGAAGCCAGTGCTTCTCTTCTCATAGGGTTAATTGTTGGCATTCTAGCAAACATTTCGGACACCGAGACTAGTATCAGGGCGTGTTATTTGTTTTATTCATGTATTGTGGCTGCCCTATGTCGTGTTTTTCTTGACTCCTCGTACTCAGTCCGGGTTCAGTCTCGCACCTTTCTTCTTATCTCTGAGACAAGCCTTTTTGACTTGGGTTTAATGGTTATTCATTTGCAGAAACCCTTTTTCTCGAATTTTGGAGCAATAGTCACATTTGCTATATTCGGCACCTTTATAGCTTCAATTGTTACCGTGTTTTCGCTGCAATCCTTGATATTGTGGTTTATTGTTGACAAATGCGGTCAATGCAGTCATAATTGTGGTAGCAGTGATCCTAAGAATTTTGCCCTTGTGGCTGAAATTGCAATTGCAGCTACTGACCCTGTAACTGTTTTGTCCATATTCCAGCTGCTATTTGAGGCCCATAGTGGCCTAGGCCTACTCCACTATCCTGTTAGAGCTTGCTATTGGCCACTAAACATTATGCTCTCCTATTTCCTATCTGAGGAGCTGGGCACTGATGTCAATCTATATGCCTTGGTTTTTGGGGAATCCGTTTTGAACGATGCAATGGCAATTTCTCTGTACAGGACAATGTCATCTGTTAAAGCTCAGCCATCTGGACAAAATTTATTCATGGTGGTTGTTCGGTTTTTGGAGACTTTTGTTGGGTCAATGTCAGCAGGTGTTGGTGTTGGATTTATATCTGCTTTGATATCCTTTGAAATCCATTCTTGTCCTATATATTTGTACATGCTTGCTGAAGGCCTTGGTCTGTCTGGTATTGTTTCAATACTGTTCACTGGAATAGTCATGAAGCACTATGCGTATTCCAATTTGTCACAAAGTTCTCAAAGATTTGCTTCAGCCTTCTTCGAGTTGATATCATCTTTAGCTGAAACATTTGTATTTATATACATGGGCTTTGATATTGCTATGGAGCAACATAGCTGGGCTGCAAATGTCTTTTCTTGTGCTTATTTAGTCAATCTGGTCAGACCCAGTCATCGAAAGATACCTCCAAAACATCAGAAGGCACTTTGGTATAGTGGACTTCGAGGAGCAATGGCTTTTGCGCTTGCTCTGCAATCCGTTCATGATCTTCCAGAAGGACATGGACAGACCATCTTTACTGCAACTACTGCAATAGTTGTCTTGACGCTGGTAGGTACCATGCTGGAAGCTCTAGATGTTGTAGGTGGTGATAATGATAGCCCTTTGTCTTCAGTTGGTACTATTACAAATTTTGATGGAAACAATGGTTATATTGCTCCTCCTTACAATGAAGAGTCATCTTCAGGGAACAAAATCAAGATGAAGCTAAAAGAATTCCACAAGAGTGCTGCATCCTTTACAGCAATTGATAAAAACTACCTCACCCCATTCTTTACAGTTCAAAATGGAGATGAAGATGATGAAGCCGAGCCTTTTACATCGGGATTTCATGGGCAGAACCGTTATTCGACATGA 1686 0.4265 MTMASEIEISPADARKAPGKEQQAAGVGILLQIMMLVLSFVLGHVLRRKKVYIIPEASASLLIGLIVGILANISDTETSIRACYLFYSCIVAALCRVFLDSSYSVRVQSRTFLLISETSLFDLGLMVIHLQKPFFSNFGAIVTFAIFGTFIASIVTVFSLQSLILWFIVDKCGQCSHNCGSSDPKNFALVAEIAIAATDPVTVLSIFQLLFEAHSGLGLLHYPVRACYWPLNIMLSYFLSEELGTDVNLYALVFGESVLNDAMAISLYRTMSSVKAQPSGQNLFMVVVRFLETFVGSMSAGVGVGFISALISFEIHSCPIYLYMLAEGLGLSGIVSILFTGIVMKHYAYSNLSQSSQRFASAFFELISSLAETFVFIYMGFDIAMEQHSWAANVFSCAYLVNLVRPSHRKIPPKHQKALWYSGLRGAMAFALALQSVHDLPEGHGQTIFTATTAIVVLTLVGTMLEALDVVGGDNDSPLSSVGTITNFDGNNGYIAPPYNEESSSGNKIKMKLKEFHKSAASFTAIDKNYLTPFFTVQNGDEDDEAEPFTSGFHGQNRYST 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01268 561 MobiDBLite consensus disorder prediction 541 561 - -
Vian6g01268 561 Pfam Sodium/hydrogen exchanger family 236 466 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vian6g01268 561 Gene3D - 188 270 - -
Vian6g01268 561 PANTHER SODIUM/HYDROGEN EXCHANGER 12 546 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01268 Vian-Chr6 30311407 30319276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01268 22 465 Antiporters AT3G05030 28.163 3.77e-27 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01268 K14724 - gmx:100790830 714.146