Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01257 ATGGCCAACGAAAACCCAGGCGACGAGGTTGTGTGCGTGACCGGCGCCAACGGTTTCATCGGTTCGTGGCTGGTTCGGACCCTCTTGGAGAACCAAAGCCATAGCTACACCATCCATGCTGCCGTCTTCCCCGGTTCCGACGCCTCTCATCTCTTCACCCTCCACCCCGCCGCCGCCTCCCGCATCACCGTCTTCCCCGCCGACCTACTCGACGCCGCCGCCGTCTTCCGCGCCGTCGCGGGATGCTCTGGCGTCTTCCACGTTGCGTCCCCCTGCACGCTGGAGGACCCCGCGGACCCTCAAAGCGAGCTTCTAGAACCCGCGGTGCAGGGCACGCTGAACGTGCTCGAAGCCGCGAGGAGCGTGGGCGTTCGGCGCGTGGTGCTCACGTCCTCGATCTCGGCAATGGTGCCGAACCCGGGGTGGCCGGCGGGAAGGGTAGTGGACGAGGAGTCGTGGACAGACGTGGAGTTCTGCAGGGCGAAGGGGAAGTGGTACCCTGTGGCGAAGACGGAGGCAGAGAGGGCGGCGTGGAAGTTCGAGGGCAGTGTCGAGGTAGTGGCGGTCCTTCCGGCGACGTGTCTGGGTCCGTTGCTGCAGCCGGAGCTGAACGCGAGCTCCGGCGTGCTGCAGAGGCTTATGATGGGGTCGAAGGAGACGCAGGAGTATCACTGGTTGGGTGCGGTGCATGTGAAGGACGTTGCTAAAGCTCATGTGTTGCTCTACGAAACTCCCTCTGCTGCTGGTAGATATCTCTGCACCAATGGTATCTATCAGTTTTCTGGTTTTGCTGCCTCTGTCTCTGAATTGTACCCTGAATTCCCTATCCACAGGTTCCCAGAAGAAACACAACCTGGCCTGGTTCCTTGTAATGGTGCAGCAAGGAGACTAATAGACTTGGGCCTTGTCTTCACACCAGTACAAGATGCTGTGAGAGAAGCAGCGGAGAGCCTTATAGCTAAAGGGTTCCTGCAGCGCTCACCCTCACAGAGTAATTAG 999 0.6036 MANENPGDEVVCVTGANGFIGSWLVRTLLENQSHSYTIHAAVFPGSDASHLFTLHPAAASRITVFPADLLDAAAVFRAVAGCSGVFHVASPCTLEDPADPQSELLEPAVQGTLNVLEAARSVGVRRVVLTSSISAMVPNPGWPAGRVVDEESWTDVEFCRAKGKWYPVAKTEAERAAWKFEGSVEVVAVLPATCLGPLLQPELNASSGVLQRLMMGSKETQEYHWLGAVHVKDVAKAHVLLYETPSAAGRYLCTNGIYQFSGFAASVSELYPEFPIHRFPEETQPGLVPCNGAARRLIDLGLVFTPVQDAVREAAESLIAKGFLQRSPSQSN 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01257 332 Gene3D - 2 332 - -
Vian6g01257 332 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 317 IPR036291 -
Vian6g01257 332 FunFam Cinnamoyl-CoA reductase 1 4 331 - -
Vian6g01257 332 CDD FR_SDR_e 11 302 - -
Vian6g01257 332 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 311 - -
Vian6g01257 332 Pfam NAD dependent epimerase/dehydratase family 11 247 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01257 Vian-Chr6 30233762 30234906 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01257 9 324 Monolignol Biosynthesis Gene Families AT2G02400 64.263 1.79e-156 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01257 - - vra:106775739 652.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g01257 6 30233762 30234906 Vian6g01257 6 30233762 30234906 ECH