Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01252 ATGGAAGACACCTCTCTCTGCTGTGAACAATTGCCGGATGGGGAATGCATTGAGGTTCAGAAAGACGAAGATGGCGCGCTGATTGAATTGGATTGTCAGAATGGTTTTCCTGAGGGGAGAAAGGAATTTGTTGCACCTGCTGTTGGAATGGAGTTTGAGTCATACGATGATGCTTACAATTATTATATTTGCTATGCCAAGGAGGTGGGGTTTCGTGTACGGGTGAAGAATTCGTGGTTCAAGCGGAATAGCAGAGAGAAGTATGGTGCAGTGCTTTGCTGTAGTAGCCAGGGTTTCAAGAGAATAAAGGATGTTAATCATTTGAGGAAGGAGACGAGAACTGGTTGTCCTGCAATGATAAGGATGAGATTGGTGGAGTCACAGAGATGGCGGGTGCTTGAAGTTATGCTTGAACATAACCACATGTTGGGTGCTAAGATACAGAGGTTGGTTAAGAAGATAGGAACTGGGTTGAAGAGGAAGTCGTTGCCTAGCTCCGAGGGGCAGACGATTAAGTTATATCGTGCACTTGTGATTGACGCGGGAGGTGATGGAATTGCAAACTCCATTGCTAGAGAAGACAGAAGTTTCTGTGAGTTTTCTAATAAGTTGAACCTTAGAAAAGGTGACTCACAGGCCATTTATAATTTCCTCTGCCGAATGCAATTGACTAATCCAAATTTCTTTTACTTGATGGATTTCAATGACGAAGGGCACTTGAGGAATGCATTTTGGGTTGATGCTAGGTCCAGGGCTGCGTGTGGTTATTTTGGCGATGTTATTTATTTTGACAACAGTTACTTGTCAAACAAATATGAAATCCAGTTGGTGACTTTTGTTGGAATAAATCACCATGGTCATTCGGTGTTATTAGGATGTGGTCTCCTTGCAAGTGAAACAACAGAGTCTTATATATGGTTGTTTAGGACATGGGTTAAATGTATGGCGGGATGTTCTCCCCAAACTATTATTACTGACAGGTGCAAGGCTTTGCAGAGAGCAATTGTAGAAGTTTTTCCTAGATGTCGTCATTGTTTTGGCTTGTCATTAATTATGAAAAAGATACCAGAAAAATTGGGAGGTTTGCACAACTATGATGCACTCAGGAAAGCACTGATTAAAGCAGTTTATGAAACATTGAAAGTGATTGAGTTTGAAGCAGCATGGGGATTTATGATTCAACATTTTGGAGTTAGTGATCATGAGTGGCTTCGTTCTCTGTATGAAGATCGAGTTCATTGGGCTCCAGTATTTTTGAAGGACACGTTTTTTGCTGGAATGTCTGCAGCTCGCCCTGGTGAGAACATTACTCCTTTTTTTGATAGATACGTGCACAAACAGACTCCGCTGAAGGAGTTTCTTGATAAGTATGAATTAGCTCTTCACAAGAAGTACAAAGAAGAGTCTTTTGCAGATATTCAATCAAGGAGCTCAAGCCCCTTGCTGAAAACTAGATGTTCCTTTGAATTGCAGCTCTCCAGATTGTACACTAGAGAAATGTTCATGAAATTCCAGTTAGAAGTGGAAGAAGTATATTCTTGTTTTGGTACAACACAGTTACATGTGGATGGTCCCATCATAATTTTCTTGGTCAAGGAGCGTGTTTTGATTGAGGGAAACCGACGGGAGATACGGGATTTTGAAGTTTTGTACAGTAGGACCGTAGGTGAAGTTCGTTGCATCTGTAGTTGCTTTAATTTTTATGGATATCTTTGTCGACATGCACTGTGTGTGCTCAATTTTAATGGGGTTGAAGAGATACCTCACAGATACATTCTTTCGCGATGGAAGAAAGATTACAAGCGTCTTTATGTTCCTGATCACAGCTCTGGTACCGCTGATGATACTGACCGCATTCAATGGTCTAATCGGTTATTTAGAAGTGCCTTGCAAGTTGTTGAGGAGGGTATACTTTCTCTAGATCATTACAATGTAGCGTTACAATCTTTAGAAGAATCATTGAGTAAGGTTCATGATGTAGAGCAGAGACAAGAGTGA 1998 0.4109 MEDTSLCCEQLPDGECIEVQKDEDGALIELDCQNGFPEGRKEFVAPAVGMEFESYDDAYNYYICYAKEVGFRVRVKNSWFKRNSREKYGAVLCCSSQGFKRIKDVNHLRKETRTGCPAMIRMRLVESQRWRVLEVMLEHNHMLGAKIQRLVKKIGTGLKRKSLPSSEGQTIKLYRALVIDAGGDGIANSIAREDRSFCEFSNKLNLRKGDSQAIYNFLCRMQLTNPNFFYLMDFNDEGHLRNAFWVDARSRAACGYFGDVIYFDNSYLSNKYEIQLVTFVGINHHGHSVLLGCGLLASETTESYIWLFRTWVKCMAGCSPQTIITDRCKALQRAIVEVFPRCRHCFGLSLIMKKIPEKLGGLHNYDALRKALIKAVYETLKVIEFEAAWGFMIQHFGVSDHEWLRSLYEDRVHWAPVFLKDTFFAGMSAARPGENITPFFDRYVHKQTPLKEFLDKYELALHKKYKEESFADIQSRSSSPLLKTRCSFELQLSRLYTREMFMKFQLEVEEVYSCFGTTQLHVDGPIIIFLVKERVLIEGNRREIRDFEVLYSRTVGEVRCICSCFNFYGYLCRHALCVLNFNGVEEIPHRYILSRWKKDYKRLYVPDHSSGTADDTDRIQWSNRLFRSALQVVEEGILSLDHYNVALQSLEESLSKVHDVEQRQE 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01252 665 Pfam FAR1 DNA-binding domain 60 143 IPR004330 -
Vian6g01252 665 SMART 26again6 558 585 IPR006564 GO:0008270
Vian6g01252 665 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 33 659 IPR031052 GO:0006355
Vian6g01252 665 Pfam MULE transposase domain 260 354 IPR018289 -
Vian6g01252 665 Pfam SWIM zinc finger 534 579 IPR007527 GO:0008270
Vian6g01252 665 ProSiteProfiles Zinc finger SWIM-type profile. 547 583 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01252 Vian-Chr6 30210806 30212803 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vian6g01252 MULE 2.7e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01252 - K17604 gmx:100796448 1262.28