Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01223 ATGGGTTCCATGCGTGTAGTACTAGTGGCAGTGTTGTGTTCATTTGCTTTGCATGCAGGGTTTTCTGTAACTAATGCTCAGCTTAGTCCTACGTTCTACAGAACAACATGTCCAAATATATTCAATATTGTGTTTCAAGTCATCTTTCAAGCTTCCACCACCGATCCCCGAATTGGGGCCAGCCTTCTCAGGCTTCATTTTCATGATTGCTTTGTTCAAGGTTGTGATGCATCAGTTTTGTTGAACAACACTGCTACCATAGAAAGCGAGCAAGATGCAATTCCAAATAACAATTCAATAAGGGGCTTGGACGGAGGAGGTCCAGGATGGCCAGTTCTATTAGGAAGAAGAGATAGTTTAACAGCAAACAGAACCCTTGCAAATCAAAACCTTCCTGCTCCTTTCTTCAACCTCACTCAACTTAAAGCAGCATTTGCTGTTCAAGGTCTCAACACCACTGATTTAGTTGCACTCTCAGGTGGTCATACGTTTGGAAGAGCTCACTGCAGCACATTCAACAACCGATTATACAACTTCAACAACACTGGAAACCCTGATCCAACTCTGAATACAACTTACTTAGCAACACTGCGTCTGATATGCCCCCAGAACGACACTGGGAATAACCTCACCAATTTGGACCTGACCACACCTGATCAATTTGATAACAAATACTACTCCAATCTACAGCACCTCAATGGCTTACTTCAGAGCGACCAGGAACTCTTCTCTACTCCTGGTGCTGATACCATTCCCATTGTCAACAGTTTCAGCAGTAACCAAAATGCTTTCTTTGCCAACTTCGTAGCGTCAATGATAAAAATGGGAAATATTGGAGTGCTGACAGGAACTGATGGAGAAATTCGCACCCAATGCAATTTTGTGAATGGAAACTCGTTTGGATTAGCTAGTATGGCGTCCAAAGATCCTAAGGAAAAGAGGGTTTCTCAATATTAA 957 0.4263 MGSMRVVLVAVLCSFALHAGFSVTNAQLSPTFYRTTCPNIFNIVFQVIFQASTTDPRIGASLLRLHFHDCFVQGCDASVLLNNTATIESEQDAIPNNNSIRGLDGGGPGWPVLLGRRDSLTANRTLANQNLPAPFFNLTQLKAAFAVQGLNTTDLVALSGGHTFGRAHCSTFNNRLYNFNNTGNPDPTLNTTYLATLRLICPQNDTGNNLTNLDLTTPDQFDNKYYSNLQHLNGLLQSDQELFSTPGADTIPIVNSFSSNQNAFFANFVASMIKMGNIGVLTGTDGEIRTQCNFVNGNSFGLASMASKDPKEKRVSQY 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01223 318 FunFam Peroxidase 132 275 - -
Vian6g01223 318 ProSiteProfiles Plant heme peroxidase family profile. 27 296 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g01223 318 PRINTS Haem peroxidase superfamily signature 154 169 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g01223 318 PRINTS Haem peroxidase superfamily signature 106 118 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g01223 318 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g01223 318 PRINTS Haem peroxidase superfamily signature 214 229 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g01223 318 Gene3D - 106 296 - -
Vian6g01223 318 PANTHER PEROXIDASE 72-RELATED 106 295 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g01223 318 SUPERFAMILY Heme-dependent peroxidases 27 296 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vian6g01223 318 Pfam Peroxidase 47 103 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g01223 318 Pfam Peroxidase 106 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g01223 318 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Vian6g01223 318 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g01223 318 PRINTS Plant peroxidase signature 228 245 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g01223 318 PRINTS Plant peroxidase signature 212 227 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g01223 318 PRINTS Plant peroxidase signature 270 283 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g01223 318 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g01223 318 Gene3D Peroxidase, domain 2 132 275 - -
Vian6g01223 318 Gene3D - 28 104 - -
Vian6g01223 318 CDD secretory_peroxidase 27 295 IPR033905 GO:0004601|GO:0042744
Vian6g01223 318 ProSitePatterns Peroxidases proximal heme-ligand signature. 154 164 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01223 Vian-Chr6 29941225 29943717 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01223 24 296 Peroxidase AT2G38380 56.026 6.91e-117 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01223 K00430 - vra:106774868 575.474