Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01221 ATGAGGGGTTTTCATGGAACACTGACAGCTCTGTGTTGTGTAGTGGTTGTGCTTGGAGTGTTTCCACTCTCTCTAGATGCACAACTTGATCCTTCCTTTTACAGAGACACATGTCCTAGGGTTCACTCCATTGTTCGTGAAGTCGTCAGGAACGTTTCAAAGAAGGACCCTCGCATGCTCGCCAGTCTCATTAGACTTCACTTTCATGACTGCTTTGTTCAAGGATGTGATGCCTCGGTTTTATTGAACAACACTGCTACAATAGTGAGTGAGCAGCAGGCTCTGCCAAACAACAACTCGTTAAGAGGTTTGGATGTTGTGAACGATATCAAGACAGCAGTGGAAAATGCTTGCCCCGGCGTGGTTTCTTGTGCAGACATTCTTACCCTTGCATCTGAAATATCTTCAGTTCTGGGAGGTGGTCCTGACTGGAAAGTTCCATTGGGAAGAAGAGATAGTTTAACAGCAAACAGAACACTTGCCAATGAAAACCTTCCAGCTCCTTTCTTCAACCTCACCCTACTGAAAGCTGCATTTGCTAAACAAGGCCTTGACACTACTGATCTAGTTGCACTATCAGGTGCTCATACATTTGGCAGAGCTCACTGTTCTTTCATTCTTGACCGATTGTACAACTTCAGTGGTACTGGAAGACCCGACCCAACTCTGGACACAACTTATTTACAACAATTACGGTCACAGTGCCCCCAAGGTGGACCTAACAACCTTGTAAATTTTGATCCAACTACTCCTGACAAAATCGACAAGGCCTACTACTCCAATCTTGTGGTTAAAAAGGGTTTGCTTCAGAGTGATCAAGAGTTGTTCTCAACGCCCGGCGCTGATACCATTCCCATTGTCACCAGGTTCAATAGCGATCAAAAGGTTTTCTTTGACGCATTTGAGGCTTCGATGATTAAGATGGGTAATATTCGTGTGCTCACTGGGAAGCAGGGAGAAATCAGAAAGCACTGTAATTTTGTTAACAAGAAATCTGTTGAACTTGATACCGTGGTCTCTGAGGAATCTTCTGCAGAGGGTCTGGTTAGCTCTTTCTAA 1059 0.4457 MRGFHGTLTALCCVVVVLGVFPLSLDAQLDPSFYRDTCPRVHSIVREVVRNVSKKDPRMLASLIRLHFHDCFVQGCDASVLLNNTATIVSEQQALPNNNSLRGLDVVNDIKTAVENACPGVVSCADILTLASEISSVLGGGPDWKVPLGRRDSLTANRTLANENLPAPFFNLTLLKAAFAKQGLDTTDLVALSGAHTFGRAHCSFILDRLYNFSGTGRPDPTLDTTYLQQLRSQCPQGGPNNLVNFDPTTPDKIDKAYYSNLVVKKGLLQSDQELFSTPGADTIPIVTRFNSDQKVFFDAFEASMIKMGNIRVLTGKQGEIRKHCNFVNKKSVELDTVVSEESSAEGLVSSF 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01221 352 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g01221 352 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g01221 352 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g01221 352 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g01221 352 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g01221 352 FunFam Peroxidase 32 172 - -
Vian6g01221 352 PANTHER PEROXIDASE 72-RELATED 25 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g01221 352 Gene3D - 33 329 - -
Vian6g01221 352 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g01221 352 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g01221 352 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g01221 352 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g01221 352 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g01221 352 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g01221 352 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g01221 352 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g01221 352 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g01221 352 CDD secretory_peroxidase 28 328 IPR033905 GO:0004601|GO:0042744
Vian6g01221 352 SUPERFAMILY Heme-dependent peroxidases 28 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vian6g01221 352 Pfam Peroxidase 45 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g01221 352 FunFam Peroxidase 166 308 - -
Vian6g01221 352 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Vian6g01221 352 ProSiteProfiles Plant heme peroxidase family profile. 28 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g01221 352 Gene3D Peroxidase, domain 2 166 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01221 Vian-Chr6 29916404 29919017 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01221 3 331 Peroxidase AT2G38380 57.485 4.47e-134 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01221 K00430 - gmx:547499 623.624