Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01219 ATGAAAATGAGGTTTCTTTGTGTTGTGGTAACAGCCCTAGTGGTACTTGGAGGGTTACCCTTTTCCTCAGATGCACAACTAGACCCCTTCTTCTACCAGTGGACTTGTCCACCCGTGCGTCATGTTGTGTTCCAAGTGGTAGAGAGAGCTTCACAAAAGGATCCTCGTCTGCCTGCCAGTCTCGTCAGGCTTTTCTTTCACGACTGTTTTGTTCAAGTATTGAGTGAGCAACAAGCCCTGCCAAACAACAACTCCATAAGAGGTTTGGATGTGGTGAATGACATCAAGACAGCAGTGGAGAATGTTTGTCCCGGCGTTGTTTCTTGTGCAGATATTCTTACTATTGCAGCTGAAGTTTCTTCTATTCTGGCTGGTGGTCCTTTCATCAAATTTCCATTGGGAAGAAGGGATAGTTTAACAGCAAACAGAACACTTGCGAATCAAAACCTTCCTTCTCCTTTCTCCACACTCGATCAACTTAAAGCAGCATTTGCTGTTCAACGTCTTGACACTGCTGATCTAGTTGCACTCTCAGGTGCTCATACATTTGGCAGAGCTCACTGCTTTTTCATTCTTAGCCGATTGTACAACTTCAGTGGCACTGGCAGACCCGATCCAACTCTGGACCCTGCTTACGCACAACAATTGCGCAATATATGCCCTCAAGGTGGACCAAACAACTTGGTAAATTTTGACCCAAACACTCCTGATAGATTCGACAAAAACTATTACTCCAACCTTCAGGTTAAGAGGGGTTTGCTTCAGAGTGACCAAGAGTTGTTCTCCACACCCGGTGCTGACACCATCGCCCTTGTGAACAGGTTCAGTGCTGACCAAAACGCTTTCTTTAGCAGCTTTGCCAAATCAATGATAAAAATGGGAAATATCGGTGTTCTCACCGGGAACAGAGGAGAAATCAGAAAACAATGTAATTTTATTAACAGAAGATCTGTTGAAGTTGATATGGGAACTGTGGCCTCCGAATCAGAGGAGGGTATGGTTAGCTCTATATAA 1014 0.4458 MKMRFLCVVVTALVVLGGLPFSSDAQLDPFFYQWTCPPVRHVVFQVVERASQKDPRLPASLVRLFFHDCFVQVLSEQQALPNNNSIRGLDVVNDIKTAVENVCPGVVSCADILTIAAEVSSILAGGPFIKFPLGRRDSLTANRTLANQNLPSPFSTLDQLKAAFAVQRLDTADLVALSGAHTFGRAHCFFILSRLYNFSGTGRPDPTLDPAYAQQLRNICPQGGPNNLVNFDPNTPDRFDKNYYSNLQVKRGLLQSDQELFSTPGADTIALVNRFSADQNAFFSSFAKSMIKMGNIGVLTGNRGEIRKQCNFINRRSVEVDMGTVASESEEGMVSSI 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01219 337 ProSitePatterns Peroxidases proximal heme-ligand signature. 173 183 IPR019793 -
Vian6g01219 337 Gene3D - 31 314 - -
Vian6g01219 337 FunFam Peroxidase 151 293 - -
Vian6g01219 337 Gene3D Peroxidase, domain 2 151 293 - -
Vian6g01219 337 ProSiteProfiles Plant heme peroxidase family profile. 26 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g01219 337 Pfam Peroxidase 45 277 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g01219 337 CDD secretory_peroxidase 26 313 IPR033905 GO:0004601|GO:0042744
Vian6g01219 337 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g01219 337 PRINTS Plant peroxidase signature 288 301 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g01219 337 PRINTS Plant peroxidase signature 230 245 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g01219 337 PRINTS Plant peroxidase signature 246 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g01219 337 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g01219 337 PRINTS Plant peroxidase signature 125 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g01219 337 PRINTS Plant peroxidase signature 172 184 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g01219 337 SUPERFAMILY Heme-dependent peroxidases 26 314 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vian6g01219 337 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g01219 337 PRINTS Haem peroxidase superfamily signature 232 247 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g01219 337 PRINTS Haem peroxidase superfamily signature 173 188 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g01219 337 PRINTS Haem peroxidase superfamily signature 125 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g01219 337 PRINTS Haem peroxidase superfamily signature 107 124 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g01219 337 PANTHER PEROXIDASE 72-RELATED 24 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01219 Vian-Chr6 29891479 29892822 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01219 5 337 Peroxidase AT2G38380 52.137 1.79e-114 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01219 K00430 - vum:124829290 645.195