Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01213 ATGAAACATTCTGTGATTTACCTTACTATGTGTCTTGCCTCTTCCATTATCATGGTGATGGCCACGGTACAAAGGGCAAGGTTCTTGTTGGGCACCAACGATTACTACGTTCGAGTGATCAACGGTTTCACTGACAATTCCTCTGTGCCGTTGGTGATTTGGTGTTCTTCCGAGGAGATGGATCTCGGAGGACGTGCCCTTCAGGAACACGATGATTTTAGCTGGGTGATGAGGCCAAATTTTTGGAGCAGCAATCGCATGAAGTGTACTATGAAATGGGACAGTACGAGGAAGAGTTTTGAGGCGTTTAAGGCTTCACGAGACACTGAACGATGTGGGATTCATAGGATGTGCTCCTGGATGGTCACTCAGGATGGGTTCTATTTCAGCAATGATGAGGATGTATCGGTCGACAATCCAAATGTTTTGCTTGTACAACTCAGCTATGATAATGAGGATGCCATTGTCATGCATATCCTTCATTTCTTTTAA 492 0.4472 MKHSVIYLTMCLASSIIMVMATVQRARFLLGTNDYYVRVINGFTDNSSVPLVIWCSSEEMDLGGRALQEHDDFSWVMRPNFWSSNRMKCTMKWDSTRKSFEAFKASRDTERCGIHRMCSWMVTQDGFYFSNDEDVSVDNPNVLLVQLSYDNEDAIVMHILHFF 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01213 163 PANTHER - 34 132 IPR010264 -
Vian6g01213 163 Pfam Plant self-incompatibility protein S1 37 133 IPR010264 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01213 49 126 Carbohydrate Esterase AT3G16970 31.646 1.20e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01213 - - gmx:100792052 255.758