Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01211 ATGGCTTGCTTTGCAGTGATGTTGAGGCAGTGTGACATTGTTATAAGGTACATGGTTTCTTGGGTTAATGTAGAAGGGGTTCCTGTGGGAATCAATTTTGTTGAAAATGCAGTGGCAAAAGGAGCTGTTTATTTGGATGGGAGTCCACTAGCTTACCACTTCCATAAGGGATCTGAAGTAGGGATTAACAACTGGATTGTTCACTTTGAGCATCCTCATCTTGTTAAACTATGTGGATCTCGTGTGGAGGGAGATCGCCTATTGTTGGCACATATGTTGAAAGAGAAAGGTGATCTAATGGAGCTAGTGGATAGGAGATTGGTTCAGACTTCAAGAAAGATGAGTGTTGTTGATGAAGTGGTGACAGAAGCAAGTGAGGTGTTGGATGAGAAAAGGATGGAGGCAATGAGAAAATATTACAGTGAGCTAAGTATAGAAGTGCCATGGACTGCTTCATCTACTTTTGCATCAGATCTTTATCCAACACATCTTGACTCTCACAAGAGGATGCTTGAGATGGATATTTCCATAATTTTGAATTTTTAG 546 0.4066 MACFAVMLRQCDIVIRYMVSWVNVEGVPVGINFVENAVAKGAVYLDGSPLAYHFHKGSEVGINNWIVHFEHPHLVKLCGSRVEGDRLLLAHMLKEKGDLMELVDRRLVQTSRKMSVVDEVVTEASEVLDEKRMEAMRKYYSELSIEVPWTASSTFASDLYPTHLDSHKRMLEMDISIILNF 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01211 181 Pfam Pectinacetylesterase 24 70 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01211 Vian-Chr6 29779717 29782087 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01211 11 70 Carbohydrate Esterase AT4G19420 55.000 2.03e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01211 K19882 - gmx:100781246 88.1965