Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01194 ATGGGCTATAGTCTTATGAGGGGATCTTCATCATCGTGTGTTCCATTAACACCAGGAAGTTATCTGAAACTAATTGGTTCATTTCAACGTCAAGATACCATGTTCAACCTTGGAAACAAAATTACACAAATGGAGAAAACAATGATGTCACAAATTGCAGTGGCTGCTAAGGAAGAATTAATTAAGCTTCTGTGTACCAATGAACCCATATGGGTCAAATCTTCAAATCATCAAAGATTTGTTCTTCATCAAGAAAGCTACCAAACATTCTTTCCAAGGATTAATCACTTCAAGAATTCTCAAGCTCGTGTAGAATCATCAAAAGATTCAAGGGTTGTGAGAGTTAAGGCACTGGAATTAGTTAACATGTTTCTGAATTCGGAATACTGGGCAGATCTTTTCTCAACAATTGTTACAAAAGCACGCTTAATCAAAGTACTTGAAAATGGTTCAAACCGAAGGGGAGTTTTGTTGTTGATGAGTGAAGAGCTGCATGTTCTTTCACCTTTAGTTCCATCTCGGGAAATGTTCTTCCTTCGTTATTGTGAACAGATTGAAACACATTCATGGGTGATAGTAGATGTTTCTGTTGACTGCACCAATGGGAACAACAATCCTAAGTATTGGAGGTTTCCCTCTGGATGCATAATTCATGAAATTTCAAATGAGTTGTGCTGGATTTCTTGGGTTGAACATGTGGAAGTGGATGAGAGGATTGAAACGCATCAACTATACAAAGATATAGTTAATAACAGCATTGCATATGGAGCAGAACGATGGCTGTTGGAACTTCAAAGAATGTGTGCAAGATTTACAAGTATTGGAAATGAAATACCTGATTATGACATCAATGGAGAGTACATTGAACATTTAGCTGAGGAGAATACTAATATTATGATTCATGCTCGGAAATACACAAACTCAAGTCAATCAAATGCCATGATTATATTCATTGCTACTACTTCTTTCCGGCTACCTGTCTCCTCGGAATATGTTTTTGACTTCTTTAGAGATCCAACAAAACGTGCTAAGTGGGATGTTATGTGTTATGAGAGTCCAGTGCACGAAGTTGCACGTGTGTCGGTTGGAACTAACCCTAGCAACTGCATATCGATTATACAGCCTCTTCACCGAACGGCTAATAACATGGCCATTATTCAGGAAAGTTTTATTGATGCTTTGGGATCATACGTTGTGTATTCCCCTGTGAATATATCTGACATAAAGATGGCTGTAAATGGTAAAGATTCAGCAAAAATGTCAATCTTTCCATCAGGCATTGTTATATCAAAAGATGTTCAATCTATCACACATGCTTCTGCATGGAGTAGTGGAAGTGATGACACGAGAAGGCACGGTACTCTACTGACTGTGACTTTTCAAATACTGATGAATGGTCCAACAACTATGGTAGCAGAATCCAAGACTGTTGTTAACTCTCTCATGACCTCAACAATACAAAAAATAAACCATGCTTTGGTAAATGGTTCTAATTTAGAGTTTTAG 1506 0.3765 MGYSLMRGSSSSCVPLTPGSYLKLIGSFQRQDTMFNLGNKITQMEKTMMSQIAVAAKEELIKLLCTNEPIWVKSSNHQRFVLHQESYQTFFPRINHFKNSQARVESSKDSRVVRVKALELVNMFLNSEYWADLFSTIVTKARLIKVLENGSNRRGVLLLMSEELHVLSPLVPSREMFFLRYCEQIETHSWVIVDVSVDCTNGNNNPKYWRFPSGCIIHEISNELCWISWVEHVEVDERIETHQLYKDIVNNSIAYGAERWLLELQRMCARFTSIGNEIPDYDINGEYIEHLAEENTNIMIHARKYTNSSQSNAMIIFIATTSFRLPVSSEYVFDFFRDPTKRAKWDVMCYESPVHEVARVSVGTNPSNCISIIQPLHRTANNMAIIQESFIDALGSYVVYSPVNISDIKMAVNGKDSAKMSIFPSGIVISKDVQSITHASAWSSGSDDTRRHGTLLTVTFQILMNGPTTMVAESKTVVNSLMTSTIQKINHALVNGSNLEF 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01194 501 Gene3D - 50 270 IPR023393 -
Vian6g01194 501 SUPERFAMILY Bet v1-like 43 271 - -
Vian6g01194 501 SUPERFAMILY Bet v1-like 292 489 - -
Vian6g01194 501 CDD START_ArGLABRA2_like 46 269 - -
Vian6g01194 501 SMART START_1 51 270 IPR002913 GO:0008289
Vian6g01194 501 ProSiteProfiles START domain profile. 42 273 IPR002913 GO:0008289
Vian6g01194 501 Pfam START domain 52 270 IPR002913 GO:0008289
Vian6g01194 501 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 32 493 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01194 Vian-Chr6 29578274 29580564 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01194 16 493 Homeobox Transcription Factor Family AT1G73360 36.538 3.92e-98 310